KEGG   Salmonella sp. SSDFZ69: EOS98_16845
Entry
EOS98_16845       CDS       T06160                                 
Name
(GenBank) DNA-binding protein HU-beta
  KO
K03530  DNA-binding protein HU-beta
Organism
salz  Salmonella sp. SSDFZ69
Brite
KEGG Orthology (KO) [BR:salz00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:salz03032]
    EOS98_16845
   03036 Chromosome and associated proteins [BR:salz03036]
    EOS98_16845
   03400 DNA repair and recombination proteins [BR:salz03400]
    EOS98_16845
DNA replication proteins [BR:salz03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    EOS98_16845
Chromosome and associated proteins [BR:salz03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    EOS98_16845
DNA repair and recombination proteins [BR:salz03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      EOS98_16845
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_bac_2 HU-CCDC81_euk_2 NolB SeleniumBinding HU-CCDC81_euk_1
Other DBs
NCBI-ProteinID: AZY99142
Position
complement(3365341..3365613)
AA seq 90 aa
MNKSQLIEKIAAGADISKAAAGRALDAIIASVTESLKEGDDVALVGFGTFAVKERAARTG
RNPQTGKEITIAAAKVPSFRAGKALKDAVN
NT seq 273 nt   +upstreamnt  +downstreamnt
gtgaataaatctcaactgatcgaaaaaattgctgcaggggctgatatctctaaggctgcg
gctggacgtgcgttagatgcgattattgcttctgttaccgaatctctgaaagaaggggat
gacgttgcactggtaggctttggtacttttgctgttaaagagcgtgctgcccgtactggt
cgcaacccgcaaacaggtaaagagatcaccatcgccgctgccaaagtgccgagtttccgt
gcaggtaaagcgctgaaagacgcggtaaactaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (7)   
   Pfam (7)   
All databases (14)   

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