KEGG   Sandaracinus amylolyticus: DB32_004089
Entry
DB32_004089       CDS       T03935                                 
Name
(GenBank) 23S rRNA (Uracil-5-) -methyltransferase RumA
  KO
K03215  23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
Organism
samy  Sandaracinus amylolyticus
Brite
KEGG Orthology (KO) [BR:samy00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:samy03009]
    DB32_004089
Enzymes [BR:samy01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.190  23S rRNA (uracil1939-C5)-methyltransferase
     DB32_004089
Ribosome biogenesis [BR:samy03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    DB32_004089
SSDB
Motif
Pfam: tRNA_U5-meth_tr Cons_hypoth95 Methyltransf_25 MTS RrnaAD Methyltransf_11 Methyltransf_31 Met_10 Methyltransf_23 RsmJ Methyltransf_12 Methyltransf_15 PDGF TPMT MetW CMAS
Other DBs
NCBI-ProteinID: AKF06940
UniProt: A0A0F6W4B2
Position
complement(4707655..4708923)
AA seq 422 aa
MKSIEGRVRGLAKDGDAVVETERGLVFAPGGLPGERVRVEDVRKEGKLLRARRLVVLEPS
ASRVEPACAHVARCGGCPWMHGSAEAQAEAKRATVERALAKVPRASSAVSLAITQPTAMF
AYRGRARLAWKGGALGLRARRDERIVDVERCLVLRPELDAALALVRARLRAHLSGSGEMQ
LAIGAGGRAVIVIETDAVLPRAAFAELEAMVAEGTVAGASVRAGGASVATRIGDPREVGR
DVEGRVIHGAIGGFSQAHDEINAALGARVIAWAEPQGARVLELYCGHGNLTLALAARAAS
VRAVELSSGATEALRENLAVHDLRAEVITADALAGVPTGKKERVDVVVLDPPRTGAKEVI
DPIAALRAARVVYVSCDPATLGRDLERLATHGYVLARVEAFDMFPQTAHVETVALMIPRA
SS
NT seq 1269 nt   +upstreamnt  +downstreamnt
gtgaagtcgatcgaagggcgcgtccgagggctcgcgaaggacggcgacgccgtggtcgag
accgagcgcgggctggtgttcgcgcccggcggactgcccggcgagcgcgtgcgcgtcgag
gacgtgcgcaaggaaggcaagctgctgcgcgcgcgtcgcctggtggtgctcgagccgtcg
gcgtcgcgcgtcgagcccgcgtgcgcgcacgtcgcgcgctgcggcgggtgcccgtggatg
cacggctcggcggaagcacaggccgaggcgaagcgcgcgacggtcgagcgcgcgctcgcc
aaggtgccgcgcgcgtcgagcgcggtgtcgctcgcgatcacgcagcccaccgcgatgttc
gcgtatcgcggccgcgcgcggctcgcgtggaagggtggggcgctcggcctgcgcgctcgg
cgcgacgagcgcatcgtcgacgtcgagcgctgcctcgtgctgcgccccgagctcgacgcg
gcgctcgcgctcgtgcgcgctcggctgcgcgcgcacctgtcgggatcgggcgagatgcag
ctcgcgatcggcgcgggcggacgcgcggtgatcgtgatcgagaccgacgcggtgctcccg
cgcgcggcgttcgcggagctcgaggcgatggtcgcggaggggaccgtcgccggcgcgagc
gtgcgcgcgggcggtgcgagcgtcgcgacgcgaatcggcgatccccgcgaggtcgggcgc
gacgtcgaaggtcgcgtcatccacggcgcgatcggcgggttcagccaggcccacgacgag
atcaacgcggcgctcggcgcgcgcgtgatcgcgtgggccgagccccagggcgcgcgcgtg
ctcgagctctactgcgggcacggcaacctcacgctcgcgctcgctgcgcgcgctgcatcc
gtgcgcgccgtcgagctctcctcgggcgcgaccgaggcgttgcgcgagaacctcgcggtg
catgatctccgcgccgaggtgatcaccgccgacgcgctcgcaggcgtcccgaccggcaag
aaggagcgcgtcgacgtcgtcgtgctcgatcctccgcgcaccggcgcgaaggaggtgatc
gatccgatcgccgcgctgcgcgctgcgcgcgtcgtctacgtctcgtgcgatcccgcgacg
ctcggccgcgatctcgagcgcctcgcgacccacggctacgtgctcgcgcgcgtcgaggcg
ttcgacatgttcccgcagaccgcgcacgtcgagacggtcgcgctcatgatcccgcgcgct
tcgtcgtga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (13)   
   KEGG ORTHOLOGY (1)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (16)   
   Pfam (16)   
All databases (35)   

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