KEGG   Sandaracinus amylolyticus: DB32_004766
Entry
DB32_004766       CDS       T03935                                 
Name
(GenBank) Single-stranded-DNA-specific exonuclease RecJ
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
samy  Sandaracinus amylolyticus
Pathway
samy03410  Base excision repair
samy03430  Mismatch repair
samy03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:samy00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    DB32_004766
   03430 Mismatch repair
    DB32_004766
   03440 Homologous recombination
    DB32_004766
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:samy03400]
    DB32_004766
DNA repair and recombination proteins [BR:samy03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     DB32_004766
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     DB32_004766
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      DB32_004766
SSDB
Motif
Pfam: DHH RecJ_OB DHHA1 CbiJ
Other DBs
NCBI-ProteinID: AKF07617
UniProt: A0A0F6W522
Position
complement(5499310..5501061)
AA seq 583 aa
MGDSVALSRPSSVPAPKSPENTAKAAWREAENDPPAALELGRALGISPTIAQILIHRGLQ
DPAVAREYLEPRLSGLTIPDGMIDRSAAADRLARAIRARERIAVFGDYDVDGTTSTAILC
DALEQMGGDVVALVASRFAGGYGLSAPALERVRATGATLLVTCDCGSSDHARVAAARAAG
IDVIVVDHHLVPAEPLPANAFLNPHRPDCAFPYKGLSSAGLALSLAAAVRAVLGAKLDLR
ELLDLVALGTIADVAPLDGDNRRLVRAGLVRLAQPTRPGLVALREQAKMRAGGSLGGIDV
AFRLAPRLNAAGRLGDPAITVALLRARTMVDARAHAIAIEALNEERKAITRRITEEAVAQ
VREIYDGRHDGGIVVASEGWHRGVVGIVAARLVDLFDAPVLAIAIEDGVGHGSGRTPAGF
PLYDAIKACRGELVTFGGHQAAAGLSVRAPRVDALRAAFDDTCRTLRAQRGDVDTSKRID
VVLDAASYPLPRASELALLEPLGASNQEPVVAVHGARVEDAQPVGDGHLKMVVRFGGTKL
RCFGWEMGASLERIGRQVDVIGTLRPDDWTGGEAVELRLAAVL
NT seq 1752 nt   +upstreamnt  +downstreamnt
atgggcgacagcgtcgccctctctcgcccttcttccgttccagcgccgaaaagcccagaa
aacacagcaaaagctgcgtggcgcgaggccgagaacgatccgccggcggcgctggagctc
gggcgcgcgctggggatctcgccgacgatcgcgcagatcctgatccaccgcggcctgcag
gatcccgcggtcgcgcgcgagtacctcgagccgcgcctctcgggcctgacgatccccgac
ggcatgatcgatcgcagcgcggccgccgatcgtctggcgcgggcgatccgggcgcgcgag
cgcatcgcggtgttcggcgactacgacgtcgacggcacgaccagcaccgcgatcctgtgc
gacgcgctcgagcagatgggcggcgacgtcgtcgcgctcgtcgcgagccgcttcgcgggt
ggctacggcctgagcgcgccggcgctcgagcgggtgcgcgcgaccggtgcgacgctgctc
gtcacgtgcgactgcggctcgagcgaccacgcgcgcgtcgccgcggcgcgcgccgcgggc
atcgacgtgatcgtcgtcgatcaccacctcgttccggccgagccgctgcccgcgaacgcg
ttcctcaacccgcaccggcccgactgcgcgttcccctacaagggcctgtcgagcgcgggc
ctcgcgctctcgctcgccgccgcggtgcgtgcggtgctcggcgcgaagctcgatctgcgc
gagctgctcgatctcgtcgcgctcggcacgatcgccgacgtcgcgccgctcgacggcgac
aaccgacgcctggtgcgcgcgggcctggtgcgtctcgcacagccgacgcggccgggcctc
gtcgcgctgcgcgagcaggcgaagatgcgcgcgggtggctcgctcggcggcatcgacgtc
gcgttccgtctcgcgccgcgcctcaacgcagcgggcaggctcggcgatcccgcgatcacc
gtcgcgctcctgcgcgcgcgcacgatggtcgacgcgcgcgcccacgcgatcgcgatcgag
gcgctcaacgaagagcgcaaggcgatcacccggcgcatcaccgaggaagcggtcgcgcag
gtgcgcgagatctacgacggccgtcacgacggcggaatcgtggtcgcgtccgaagggtgg
caccgcggcgtggtcggcatcgtcgcggcgcgcctcgtcgacctgttcgacgccccggtg
ctcgcgatcgcgatcgaagacggcgtcgggcacggcagcgggcgcacgcccgcgggcttc
ccgctctacgacgcgatcaaggcgtgccgcggcgagctcgtcacgttcggcgggcaccag
gccgcagcagggctcagcgtgcgtgcgccgcgcgtggacgcgctgcgcgctgcgttcgac
gacacgtgccgcacgctccgcgcgcagcgcggggacgtggacacgtcgaagcgcatcgac
gtcgtgctcgacgcggcgagctacccgctgccgcgcgcgtcggagctcgcgctgctcgag
ccgctcggcgcatcgaaccaggagcccgtcgtcgcggtgcacggcgcgcgcgtcgaggat
gcgcagccggtcggggacgggcacctcaagatggtcgtgcgcttcggcggcacgaagctg
cgctgcttcggctgggagatgggcgcgtcgctcgagcgcatcggccgccaggtcgacgtg
atcggcacgctccgccccgacgactggacgggcggcgaagccgtcgagctccgcctcgcc
gccgtcctctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (15)   
   KEGG ORTHOLOGY (1)   
   RefGene (12)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (26)   

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