KEGG   Sinocyclocheilus anshuiensis: 107669816
Entry
107669816         CDS       T04917                                 
Name
(RefSeq) collagen alpha-2(I) chain-like
  KO
K06236  collagen type I alpha
Organism
sanh  Sinocyclocheilus anshuiensis
Pathway
sanh04510  Focal adhesion
sanh04512  ECM-receptor interaction
sanh04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:sanh00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    107669816
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    107669816
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    107669816
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00536 Glycosaminoglycan binding proteins [BR:sanh00536]
    107669816
Glycosaminoglycan binding proteins [BR:sanh00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   107669816
SSDB
Motif
Pfam: Collagen COLFI
Other DBs
NCBI-GeneID: 107669816
NCBI-ProteinID: XP_016317714
Position
Unknown
AA seq 1352 aa
MLSFVDTRILLLLAVTSYLASCQSGPRGPKGPRGERGPKGPDGKPGRPGLTGPPGPPGPP
GLGGNFAAQFDGAKGLDPGPGPMGLMGPRGPSGPPGAPGPQGFQGHAGEPGEPGQAGAVG
SRGPPGPSGKNGEDGNNGRPGKPGDRGGPGAQGARGFPGTPGLPGMKGHRGYTGLDGRKG
EPGAAGFKGENGAAGSNGTPGQRGGRGLPGERGRVGPSGPAGARGADGNTGPAGPAGPLG
AAGPPGFPGAPGPKGEIGSVGPTGPSGPQGQRGEPGQNGAVGPVGPPGNPGANGINGAKG
AAGTPGVAGAPGFPGPRGGPGPQGPSGASGPRGLAGDPGPVGVKGDAGVKGEPGSAGPQG
PSGPFGEEGKRGSTGEQGATGPAGLRGPRGAAGTRGLPGLAGRSGPMGMPGARGATGSSG
ARGPPGDAGRAGEPGLVGARGLPGSPGSSGPPGKEGPSGLAGQDGRTGPPGPTGPRGQPG
NIGFPGPKGPSGESGKPGEKGPTGPSGLRGLPGPDGNNGPSGPVGLAGAPGEKGEQGASG
APGFQGLPGPAGPVGEAGKPGDRGIPGDQGVSGPAGVKGERGNPGPAGAAGAQGPIGARG
PAGTPGPDGNKGEPGAVGAAGAPGHQGAGGMPGERGGAGTPGPKGEKGEQGYRGLEGNVG
RDGARGAPGPSGPPGPAGANGDKGETGSFGPAGLAGPRGAPGERGESGPAGPSGFAGPPG
ADGQTGPRGEKGPAGGKGDVGPHGPAGPAGNTGPLGPTGPAGPPGARGDSGPSGLTGFPG
AAGRVGPPGPAGIVGPAGPTGAPGKDGPRGSRGDVGPAGPPGENGLIGPSGLAGEKGSPG
EAGVPGAPGPAGPQGQLGSLGFNGLPGSRGDRGLPGGPGAVGESGRVGPAGAPGPRGPLG
NIGMPGMTGPQGEAGREGSSGNDGPPGRPGASGLKGDRGEPGSPGPAGSVGAPGPNGPSG
AAGRPGNRGESGPSGSAGPVGSAGARGAPGPSGPRGEKGVAGDKGERGMKGLRGHPGLQG
MPGTNGPSGDSGPAGVAGPAGPRGPAGPNGPPGKDGSNGMPGAIGPSGHRGPPGHVGPSG
PPGSPGLPGPPGAAGGGYDTSGGYDEYRADQASLRAKDYEVDATIKSLNTQIENLLSPEG
SKKNPARTCRDIRLSHPEWSSGFYWIDPNQGCTVDAIKAYCDFSTGQTCIHPQPESIPRK
NWYRSSQEKKHIWFGETINGGTEFGYNDETLSPQSMATQLAFMRLLANQAVQNITYHCKN
SIAYMDAENGNLKKAVLLQGSNDVELRAEGNSRFTFSVLEDGCSRHTGQWSKTVIEYRTN
KPSRLPILDIAPLDIGGADQEFGLDIGPVCFK
NT seq 4059 nt   +upstreamnt  +downstreamnt
atgctcagctttgtggatacccggattctgttgctgcttgcagtgacttcgtacctagca
tcatgtcaatcgggccccaggggaccaaaaggacccagaggtgagaggggtcctaaagga
ccagatggaaaacccggcagacctggacttactgggcctcccggcccccctggcccccct
ggtcttggtggaaactttgctgctcaatttgatggcgctaaaggacttgaccctggccct
ggccctatgggtttgatgggacctagaggcccatctggacctcccggtgcccctggacct
caaggattccaaggacatgctggtgagcctggagagcccggacaggctggagctgttggg
tctcgtggacctcctggaccttctggcaaaaatggtgaagatggtaacaatggcagacct
ggaaaacctggagacagaggaggccctggagcacagggtgcccgtggtttccccggaact
cctggacttcctggcatgaagggacacagaggttacaccggtcttgatggacgcaaagga
gagcctggtgccgctggttttaagggtgagaatggtgctgctggatcaaatggaaccccc
ggacagagaggtggtcgtggtcttcctggtgagagaggtcgtgttggcccttctggccca
gctggtgctcgcggtgctgatggcaacactggtcctgctggccctgctggtcctttggga
gcagctggtcctcccggtttccctggtgctcctggacctaagggagaaattggatccgtt
ggtcccactggcccatctggacctcagggacaaagaggagagccaggccagaacggtgct
gtgggcccagtcggaccccctggtaaccctggtgctaatggtatcaacggtgctaaggga
gcagctggcacccctggtgttgctggtgcccctggtttccctggccctagaggtggccct
ggcccccagggaccttctggagcctctggtccaagaggtcttgctggtgaccctggaccc
gttggagtgaagggagatgctggtgtcaagggtgagcctggtagtgctggtcctcaggga
cccagtggtccttttggtgaagagggcaagagaggctcaactggtgagcagggagcaact
ggacccgctggactgcgtggacctagaggagctgctggtactcgtggtctgcctggtctg
gctggcagatcgggcccaatgggcatgcctggtgcccgtggtgctactggttcctctgga
gcccgtggacctcctggagatgccggtcgtgctggtgagcctggtcttgttggagctaga
ggtctccctggtagccccggcagttctggaccccctggaaaggaagggccttctggtctt
gctggtcaagatggccgcactggcccccctggcccaactggacccagaggccagcccggt
aatattggattccccggtcccaagggaccttctggcgagtctggcaagcctggtgagaag
ggacctactggccccagtggactgagaggtcttcctggtccagatggtaacaatggccct
tctggtcccgtcggacttgctggtgctccaggtgagaagggagagcagggagcatctggt
gctcctggtttccagggtcttcctggccccgctggacctgttggtgaggccggcaagccc
ggagatagaggtatccctggagatcaaggtgtatcaggacctgctggtgtgaagggagag
cgtggtaaccctggacccgctggtgctgctggcgctcagggacccattggtgctcgtgga
cctgctggtactcctggccctgatggaaacaagggagagcctggtgcagttggagctgct
ggtgcccctggacaccagggagctggtggtatgcccggtgagcgtggtggcgctggaact
cctggacctaaaggagagaagggtgagcaaggatacagaggcctggagggcaatgttgga
agagatggtgcccgtggtgctcctggacccagtggaccccctggacccgctggtgctaat
ggtgacaagggtgagactggctctttcggccctgctggacttgctggtcctcgtggtgct
cctggcgaacgtggtgagtctggccctgctggaccttctggatttgctggaccccctggt
gctgatggccagactggaccaagaggtgagaaaggacctgctggtggaaagggtgatgtt
ggaccccacggccctgctggtcctgctggcaatactggacccctcggtcctactggtcct
gctggcccacctggtgcccgtggtgactccggtccatctggtctgactggtttccctggt
gctgctggcagagttggacctcctggtcctgctggtattgttggacctgctggtcccact
ggtgctcctggaaaggatggcccacgtggttctcgtggtgatgttggccctgctggtccc
ccaggagagaatggactgattggaccatctggtctggctggagagaagggatctcctgga
gaggctggcgtacctggagcacctggacctgctgggcctcagggtcagctgggatctctg
ggattcaatggtcttcctggctccagaggtgaccgtggtcttcctggtggccccggtgct
gttggtgagtctggaagagttggccctgctggtgcccctggtccccgtgggccccttggc
aacattggcatgcctggtatgactggtcctcagggagaggctggacgtgagggaagctct
ggtaatgatggacctcctggacgtcctggtgcttctggccttaagggagaccgtggtgag
cctggttcccctggacccgctggatctgtcggtgctcctggacccaatggaccatcaggc
gctgctggcagacccggaaaccgtggtgaatctggaccttctggatctgctggccctgtt
ggatctgctggagcaagaggtgcacctggcccttctggacctcgtggtgagaaaggtgtt
gctggagacaaaggagaaaggggcatgaagggacttcgtggacatcctggtctgcaggga
atgcctggaaccaatggtccttctggtgacagcggccctgctggtgtggctggtcctgct
ggtccaagaggcccagctggtcctaatggcccccctggtaaggacggctcaaatggcatg
cctggtgctattggaccctctggacaccgtggtcctcctgggcatgttggaccttctggt
cctcctggatctcctggtcttcccggaccccctggtgcagctggtggtggatatgacaca
tctggaggctatgatgagtacagagctgaccaggcctctctcagggctaaggattatgag
gtggatgccaccatcaagtccttgaacactcagattgagaatctgctttcccctgagggc
tcaaagaagaaccctgcccgtacttgccgtgacatcaggctcagccaccctgaatggagc
agtggtttctactggatcgaccccaaccagggctgcaccgtggatgccatcaaggcctac
tgcgacttctctactggccagacctgcatccacccccagccagagagcattccacgcaaa
aactggtacagaagctcccaggagaagaaacacatttggttcggcgagaccatcaatggt
ggtactgagttcggttacaatgatgagaccctgagcccacagtccatggctactcagctg
gccttcatgcgtttgctggccaaccaggcagtccagaacatcacctaccactgcaagaac
agcatcgcctacatggatgccgagaatggaaacctgaagaaggctgtgttgctgcagggc
tccaatgatgtggagctcagggcggagggcaacagccgcttcactttcagcgtcctagaa
gatggctgcagtagacacactggccagtggagcaagacagtcattgaatacagaacaaat
aaaccatctcgccttcccatcctcgacattgcacctttggacattggtggcgcagatcaa
gagtttggtttggacattggcccagtctgtttcaaataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (14)   

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