KEGG   Sinocyclocheilus anshuiensis: 107670107Help
Entry
107670107         CDS       T04917                                 

Definition
(RefSeq) autophagy-related protein 16-1-like isoform X1
  KO
K17890  autophagy-related protein 16-1
Organism
sanh  Sinocyclocheilus anshuiensis
Pathway
sanh04136  Autophagy - other
sanh04140  Autophagy - animal
sanh04621  NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:sanh00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    107670107
   04136 Autophagy - other
    107670107
 09150 Organismal Systems
  09151 Immune system
   04621 NOD-like receptor signaling pathway
    107670107
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:sanh04131]
    107670107
   03029 Mitochondrial biogenesis [BR:sanh03029]
    107670107
Membrane trafficking [BR:sanh04131]
 Autophagy
  Autophagosome formation proteins
   Atg12 conjugation proteins
    107670107
 Others
  Rab GTPases of specific organelles
   Auto phagosome
    107670107
Mitochondrial biogenesis [BR:sanh03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Autophagy-related proteins
    107670107
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: ATG16 WD40 ANAPC4_WD40 Ge1_WD40 Nup160 KASH_CCD DUF4472 Bacillus_HBL ADIP Fez1
Motif
Other DBs
NCBI-GeneID: 107670107
NCBI-ProteinID: XP_016318075
Position
Unknown
AA seq 632 aa AA seqDB search
MASVILQSGEEMAGRRVECLWKRHVVEQLKQRDRVQRQAFEEIIHQYNRLLEKSDLQVVF
SERLQTEKYEQQNRHDLSPGVEGGRIESLQQEMAQMRIKHQEELTELHKKRGELAQSVIE
LNNQIQQKDKEIQSNEAKMLEYQQQISHLEGECHELRNSLADLERANQTLRDEYDALQIT
FSALEEKLRKTTEDNQELVTRWMAEKAQEANKLNAENEKDSRRRQAKLQKELADAAKEPL
PIEPDDDIEVLTEDAGKGTGETSPSRQISRTLSRRVSQPPPPAGLLDSISNIFGLSDSVQ
PGFVPSDSRRRRSVNSFGSSPESAEVPSACTDVRVPSTALHIFDAHDGEVNAVRFSPGSR
LLATGGMDRRVKLWEVISGRCEPKGALTGSNAGITSIEFDSAGLYLLAASNDFASRIWTV
DDYRLRHTLTGHSGKVLSARFLLDNSRIVSGSYDRTLKLWDLRSKVCMKTVFAGSSCNDI
VCTEQCVMSGHFDKKVRFWDIRSESIVCELELLGRITSLDLNHDRTELLSCSRDDLVKII
DLRSNAVRQTFDAQGFKCGSDFTRVTFSPDGSYVAAGSADGVLYIWNVLTGKLDKTLDKG
HSSAINSVSWSPSGAYVASVEKGSKAVLWSDM
NT seq 1899 nt NT seq  +upstreamnt  +downstreamnt
atggcgtccgtgatccttcagtctggagaggagatggcgggccgtagagtcgagtgtttg
tggaaacgtcatgttgtcgagcagctgaagcagagagacagagttcagcgtcaggccttc
gaggaaatcatacaccagtataaccggttgttggagaagtctgatcttcaggttgttttt
tctgaacgtctccagaccgagaaatatgagcaacagaacagacacgacctcagtccgggc
gtcgagggcggtcgcattgagtccctgcagcaagaaatggctcagatgagaattaaacat
caagaggagctgacggagctgcacaagaaacgaggagagttggcccagagcgtgattgaa
ctaaacaaccagattcagcagaaagacaaagagatccagagtaatgaagccaagatgtta
gagtatcagcagcagatctctcatctggaaggagagtgtcacgagctgcgcaactctctg
gccgatctggaacgagccaatcagacgctgcgagacgagtacgatgccctgcagatcacg
ttcagtgccctggaggagaaactacggaaaaccacagaggacaatcaggagctggtgaca
cgctggatggccgagaaagcgcaggaggccaacaaactcaacgctgagaacgagaaggac
tccaggcgcagacaggcgaagcttcagaaggaattggcggacgcagcgaaggaacctctt
cccatagagccagatgatgacatcgaagttctcacagaggatgctgggaagggaacgggt
gagacgtcaccgagcagacagatcagtcgcacactcagcagacgagtgtctcagccacct
cctcctgctgggctgctggattccatctctaatatctttggcttgtctgattctgtccaa
cctggtttcgtcccatctgactccagaagacggcgctcggtgaattcgttcggctcgtct
cctgaaagcgcagaggtgccatcggcgtgcactgatgtcagagttccctccactgcgctg
cacatctttgacgcccacgatggagaagtgaacgccgtgaggttcagtcctggttcccgt
ctgcttgccacgggaggaatggaccgcagggtgaagctctgggaggtcatttctgggcga
tgtgaacctaaaggtgcgctgacgggcagtaatgctggaatcaccagcatagagtttgat
agtgcgggcttgtatctattggctgcatctaatgattttgccagcagaatctggacggtt
gatgattacagactgcggcacacactcacagggcacagcgggaaggttttatccgctcgg
tttctcctcgataactctcggatcgtctccggcagctacgaccgaacgctcaagctctgg
gacttgcgcagcaaagtctgcatgaagacggtgtttgctggttctagctgtaatgacatc
gtctgcacggagcagtgtgtgatgagcggacacttcgataagaaagttcgtttctgggac
atcaggtcggagagtatcgtgtgtgagctggagttgctgggacgcattacatctttggac
ctcaatcacgaccggaccgagctgctgagctgctctcgtgacgatctggtgaaaatcatc
gacctgcgcagtaatgcagtgcgacagacgtttgatgctcaaggtttcaagtgtggttca
gacttcaccagggtcacgttcagtcctgatgggagttacgtggcggccggttctgcagac
ggcgttctgtacatttggaacgttctgacggggaaactagacaaaacccttgataagggt
cacagttctgccataaattcggtgtcctggtctccgtcaggcgcgtatgtggccagcgtt
gagaaaggcagcaaggccgtgctttggtctgacatgtga

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