KEGG   Sinocyclocheilus anshuiensis: 107671118
Entry
107671118         CDS       T04917                                 
Name
(RefSeq) endoribonuclease Dicer isoform X1
  KO
K11592  endoribonuclease Dicer [EC:3.1.26.-]
Organism
sanh  Sinocyclocheilus anshuiensis
Brite
KEGG Orthology (KO) [BR:sanh00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:sanh03036]
    107671118
Chromosome and associated proteins [BR:sanh03036]
 Eukaryotic type
  Gene silencing
   RISC (RNA-induced silencing complex)
    107671118
   microRNA pathway
    RISC loading complex
     107671118
SSDB
Motif
Pfam: Dicer_platform Dicer_dsRBD Dicer_PBD Ribonuclease_3 Ribonucleas_3_3 Dicer_dimer PAZ ResIII DEAD Helicase_C dsrm DUF87
Other DBs
NCBI-GeneID: 107671118
NCBI-ProteinID: XP_016319449
Position
Unknown
AA seq 1880 aa
MAGLQLVTPASSPMGPFFGLPWQQEAIHDNIYTPRKYQVELLEAALEHNTIVCLNTGSGK
TFIAALLIKELSHQIRGEDGKRTVFLVNAASSVVQQASTVRTHSDLQVGDYMSEDMTSWP
EEMWNREMMENQVLVMTCRIFFHVLKNGVLPLSKINLLVFDECHLAITDHPYREIMKVCE
GCPGCPRILGLTASILNGKCDPCDLEEKIQNLEKILQSSAETATDLVVLDRYASQPREVV
LDCGLYQDQSGLSERLLNELDEALHFLNDCNLSAHREDRDPTFISKQVLNDCRAVLTVLG
PWCADKAAGIMVRELQKYIKHEQEELNRKFLLFTDTILRKIHALCEEHFSPASLDLKFVT
PKVIKLLEILHEYKPFERQQFESVEWYNNRNQDNYVSWSDSEDEDEEEEAEAKEKPEANF
PSPFTNILCGIVFVERRYTAVVLNRLIKEGGKQDPELAYISSNFITGHSIGKNQPRNKQM
EVEFRKQEEVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRSYVQSKGRAR
APVSNYIMLADSERTNTFEEDLKTYKAIEKILRNKCSKSAECSDFELEPATDDDNVLPPY
VLRSEDGGPRVTINTAIGHINRYCARLPSDPFTHLAPKCKTVELKTGGYQSTLFLPINSP
LRVPVTGPTMNCARLAEKAVALLCCEKLHKIGELDDHLMPVGKETVKYEEELDLHDEEET
NVPGRPGSTKRRQCYPKAIPECLRGCYPVPEQPCYLYVIGMVLTTPLPDELNFRRRKLYP
PEDTTRCFGILTAKPIPRIPHFPVYTRSGEVTISIELQKSDFTLSAEQLELITRLHQYIF
SHILRLEKPALEFKPVEADSAYCILPLNIVEDSNTLDLDFKFMEDIEKSEARIGIPNTQY
TKKNPFIFKLEDYQDAVIIPRYRNFDQPHRFYVADVYTDLTPLSKFPSPEYETFAEYYKT
KYNLDLSNVNQPLLDVDHTSSRLNLLTPRHLNQKGKALPLSSAEKRKAKWESLQNKQILV
PELCAIHPIPASLWRKAVCLPSILYRLHCLLTAEELRSQTAIDAGVGAQTLPPDFRYPNL
DFGWKKSIDSKSFISCPSACMEDDDHCKHGTSSDSDHTAQEGCSTEASQPPEGALPCENC
NTPDEKLETHPVLPVTDLQTPNKDKSDCVCSRNLNGTRSDNDNLPHRRDICQCSQLGPLE
SDLSTQTTTSVPVRPSLAGEPQPQPSDECTPGRNSDLCDGHVKKPTSNCCPKPEMATSTT
APSEVSSEVSDVTSTLACTGPAWDSPKTLGPNPGLILQALTLSNASDGFNLERLEMLGDS
FLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNLYRLGKKKGLPSRMVVSIFDPPVNWL
PPGYVVNQDKSSTDKWDSDENKDLANGKASDDEDDDDEAEDVEVEPSKEEVNVEDELEYY
YEHIRFIDNMLIGSGAFGKKISLQPAEPGYEWKAPKKAHNSHFSPDGGTDEFDYSSWDAM
CYLDPSKAGEEDDFVVGFWNPSEENCGTDIGKQSISYDLHTEQCIADKSIADCVEALMGC
YLTSCGERAAQLFLCSLGLKVLPAEKQSSGGSAKLQYGWLKIPPRCMFDHPDAERTLNHL
ISGFENFEKKIKYTFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYE
DPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFKAVSPELFHVIDDFVQFQLEKNEM
QGMDSELRRSEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLETVWQVYYPMMRPLI
EKFSANVPRSPVRELLEMEPETAKFSPAERTYDGKVRVTVEVVGKGKFTGVGRSYRIAKS
AAARRALRSLKANQPQVQNN
NT seq 5643 nt   +upstreamnt  +downstreamnt
atggctggcctacagctggtgacccctgcctcctcacccatggggcccttcttcggtctc
ccgtggcaacaggaagctatccatgacaacatatacacaccaaggaaatatcaggttgaa
cttcttgaagcagctcttgaacacaatactattgtctgcttaaatactggctcagggaag
acctttatcgcagcactcctaatcaaagaactctcccaccaaatccgtggagaggatggg
aagagaacagttttcctggtgaatgcagcatcatctgtggttcagcaagcatctactgta
agaacccactctgatctccaggtgggcgactacatgtcagaggacatgacatcatggccc
gaggagatgtggaacagagagatgatggagaatcaggtgctggtcatgacgtgccgcatc
ttcttccacgtgttaaaaaatggagtcttgccactatcaaaaatcaacctgctggttttt
gacgaatgccaccttgcaatcacagaccatccttatcgggaaataatgaaggtttgtgag
ggttgcccaggctgtcctcgcattttgggtctgactgcttccattttaaatggcaaatgt
gacccttgtgatttggaggagaagattcagaacctggaaaagattctgcagagcagtgca
gaaactgccactgatcttgtggtgctggataggtatgcgtcccagcctcgtgaggtggtg
ctggattgtgggctgtaccaggatcagagtgggctctctgagaggcttttaaatgagctg
gatgaagcccttcattttcttaatgactgcaacttatctgctcatcgagaagatagagat
cccacattcatctccaaacaggtgctgaatgactgccgcgccgtgttgactgtgttgggc
ccttggtgcgccgataaagctgcaggaatcatggtccgggagctgcagaaatatatcaaa
catgaacaggaagagctgaaccgcaagttcctattgttcacagacaccattctgagaaaa
atccacgccttatgtgaggagcatttctccccagcttccctagacctgaagtttgtcact
cccaaggtcatcaaacttctggagattctccacgagtacaagcctttcgaacggcagcag
tttgagagtgtggagtggtacaataatcgcaatcaggacaattatgtttcttggagcgat
tctgaggacgaagatgaggaggaagaggcagaggcaaaggaaaagcccgaagctaatttt
ccgtcaccttttaccaacatcctctgtggaatcgtcttcgtggaaaggcgttatactgca
gttgttttaaacagacttatcaaggagggagggaagcaggacccagagctggcctacatc
agtagcaacttcatcacaggtcacagcattggcaagaaccagcctcgcaacaaacaaatg
gaggtggagttcagaaaacaagaggaggtcctgaggaagttcagagcccatgaaaccaac
ttgctcattgcaaccagcattgtggaagaaggcgttgatattccaaagtgcaatttggtc
gttcggtttgacctgccaacagagtaccggtcgtatgtgcaatccaaaggtcgcgcccgg
gctccagtctccaattacatcatgctagctgacagcgaacggacaaacacatttgaggaa
gacctcaagacctacaaggccatagagaagatcctccgaaataagtgctcgaagtcagca
gaatgcagtgattttgaactggagccagcgaccgatgatgacaacgttttaccaccttac
gtcctacgctcagaggacggcggcccccgtgtcacgattaacacagccattgggcacatc
aacagatattgtgctcgcttgcccagtgatccgttcactcatcttgctccaaagtgtaaa
actgtggagcttaagactggaggttatcagtccacactcttcctacccattaactcacca
ctcagagttcctgtcaccgggccaacaatgaattgtgcaagacttgctgagaaagctgtt
gctcttctctgttgtgaaaagctgcacaaaattggtgaactggatgatcatttgatgcca
gtgggaaaggaaactgtgaagtatgaggaggagctggacctgcatgatgaggaggagacg
aacgtgccaggaagaccaggctccaccaaacggagacagtgttacccaaaagccatacca
gagtgtctgcggggttgttaccctgtgccagaacagccttgctatctttacgtaataggg
atggtcctcaccacccctcttcctgatgagctcaacttccggcggaggaagctgtaccca
ccggaggacactacccgatgttttggcattctgacagctaaaccaatacctcggatccct
cacttccctgtgtatacacgttctggtgaggtgaccatttcgattgagctgcagaagtca
gactttactctgagcgcggagcagctggagctgatcacacgtttgcaccagtacatcttc
tcccacatccttcgtcttgaaaagccagcactagagtttaagcccgtagaggcagattct
gcctactgcattctacctctcaacattgttgaggattccaatacgttggacctggatttc
aagttcatggaggatattgaaaagtctgaagcacgtattggcattccaaatactcagtac
accaagaaaaacccattcattttcaaattggaggactaccaggatgctgtcatcattcca
aggtatcgtaattttgaccagccacatcggttctatgtggctgacgtttacacagacctc
accccactcagtaaattcccctctccagagtacgagactttcgctgagtactacaaaacc
aagtacaacctggacctgtctaatgttaaccagcccctactggatgtggaccacacatct
tcaagattgaatcttttaactccccggcaccttaatcaaaaggggaaagcccttcctctc
agtagtgcggagaagagaaaggccaagtgggaaagcctacaaaacaaacagattttagtt
ccggagctctgtgccattcaccccatcccagcctctttgtggaggaaagccgtctgcctt
cccagcattctctacagacttcactgccttctgacggccgaagagttgcggtctcagaca
gccattgacgctggtgtaggggctcagaccctgcctcctgatttcaggtatccaaatttg
gatttcggatggaagaaatccatcgatagcaagtctttcatttcctgccccagtgcatgt
atggaagacgacgatcactgtaaacacggcacaagctccgattcagaccacactgcccag
gagggctgcagtacggaggcctcccagcctccagagggcgctctcccctgtgagaactgc
aacacaccagatgaaaagctagaaacccaccctgtgctccctgtgactgatctccagacg
ccgaacaaagacaagagtgactgtgtctgttcccgaaacctcaacggcactcggagcgac
aacgacaaccttccacacagacgtgacatttgccaatgctctcagctgggccctctggag
agtgacctatcaacacaaaccactacctcagttcctgtgaggccctctctagccggcgag
ccacagccccagcccagcgatgaatgtaccccaggcaggaactcggatctctgcgacgga
catgtgaaaaaacctacctcaaactgttgccccaaaccagagatggcaaccagcaccaca
gcaccttcagaagtgtcatcagaggtctctgacgtgacatctacattagcctgcacaggt
ccagcctgggattctccgaaaaccttgggccccaaccccggcctcatcttgcaggccctg
accctctccaacgccagtgatggcttcaatctggagaggttggagatgttgggcgactct
ttcctgaaacacgcaatcaccacctacctgttctgcacttaccctgacgcccacgagggc
aggctgtcatacatgaggagcaagaaggtcagcaactgtaacctttatcgcctggggaag
aaaaagggccttcccagtcgaatggtggtatccatatttgatcccccagtaaactggctt
ccccccggctatgttgtgaatcaggacaaaagcagcacagacaagtgggactcagatgag
aataaagatttggccaatggaaaagccagtgatgatgaggatgatgacgatgaggcagag
gatgtggaggtcgagccgtctaaagaagaggtcaacgtggaagatgaactggagtactac
tatgagcacatcagattcatcgataacatgctgattggctccggtgccttcgggaagaag
atctccctccagccggccgagcctggctacgaatggaaagcccccaaaaaagctcacaac
tcccacttttccccagacggcggcactgacgagttcgattacagttcctgggacgccatg
tgctaccttgaccccagcaaagctggcgaggaggatgacttcgtggtgggcttctggaac
ccctccgaggaaaactgtggcacggatattgggaaacagtccatctcctacgaccttcac
actgagcagtgcatcgccgataagagcatagctgactgtgtggaggctctgatggggtgc
tacctcaccagctgtggggagagggcagcccagctgttcctgtgttccctcggcctgaag
gtgctcccggcagagaagcagagttcaggggggtcggccaagctgcagtacggctggctg
aagatccctccgcgctgcatgtttgaccacccggatgctgagcggaccctcaaccacctc
atctctggcttcgagaactttgagaagaagataaaatacacgtttaaaaacaaggcatat
cttctgcaggctttcactcacgcctcgtatcattacaacaccatcacagattgttatcag
cggttggagttccttggtgatgcaattttagactacctcataacaaagcacctttatgaa
gatccccggcagcactccccaggcgtgctgaccgacctgcgctctgcacttgtcaacaac
accatatttgcttccctggctgtcaagtacgattaccacaagtacttcaaagctgtctcg
cctgaactgttccacgtgatcgatgattttgtgcaatttcagctagagaagaatgaaatg
caaggaatggattcggagcttcgccgatcagaggaagatgaggagaaggaggaagacatt
gaggtccccaaagcaatgggagacatctttgaatcgctagctggtgcaatttacatggat
agcgggatgtcacttgagacagtttggcaagtgtattatccaatgatgaggccactcata
gaaaaattctccgctaatgtccctcgatccccagtgcgtgaactcctggagatggaacca
gagacggctaagttcagccctgcggagagaacctacgatggaaaagtacgggtgacggtg
gaagtggtgggcaaaggcaagttcacaggcgtgggacgcagctaccggatagccaagtca
gcggccgcccgccgagccctgcgcagtctcaaagccaatcaacctcaggtccaaaataac
tga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (12)   
   Pfam (12)   
All databases (25)   

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