KEGG   Sinocyclocheilus anshuiensis: 107679140
Entry
107679140         CDS       T04917                                 
Name
(RefSeq) collagen alpha-4(VI) chain-like
  KO
K06238  collagen type VI alpha
Organism
sanh  Sinocyclocheilus anshuiensis
Pathway
sanh04510  Focal adhesion
sanh04512  ECM-receptor interaction
sanh04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:sanh00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    107679140
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    107679140
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    107679140
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:sanh04147]
    107679140
   00536 Glycosaminoglycan binding proteins [BR:sanh00536]
    107679140
Exosome [BR:sanh04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   107679140
Glycosaminoglycan binding proteins [BR:sanh00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   107679140
 Hyaluronan
  Extracellular matrix or blood plasma proteins
   107679140
SSDB
Motif
Pfam: VWA VWA_2 VWA_3 VWA_CoxE Radical_SAM DUF1194
Other DBs
NCBI-GeneID: 107679140
NCBI-ProteinID: XP_016330085
Position
Unknown
AA seq 1013 aa
MGNSSMGKEWGLLGFLVLSLCFLVSNGQNIVCTQETMADIVFLVDGSASIGLENFQQIRE
FVSLLIENLEVAADRIRIGLVQFSDTPHTEFSLNTYQNKEDILRYIQNLRYKTGGTFTGQ
GLEFMLKQHFVEKAGSRAQQSVPQIAIIITDGESQDEVGSQAQELRQRGIKIFAIGIKDA
NETLLRQIASDPYDQHVYSVSDFAALQGISQSVIREVCTAVEETHKEIIQMSRGCNETAQ
ADIVLLVDSSGSIGASDFEEVRKFLHAFVDSFNLRPDKVRVGLAQFSDRPYQEFLLGDYL
HKTDLHQKLNGLIYHSGGTNTGRALTFIRENYFSLARKSVPGIVIVITDGESNDDMEEPS
QRLRNLGVFIFVIRVGMGNMEKLRAIANIPHEEFLFSIDNYQELQGLKAGLCNKVCFTVL
LQSEAFVPKFADLFILVDSSASRQEQQTIKSFLSKLVTQLNVGKDFNRVGLAQFSKNVKE
EFLLNTDKTKNEIVSSIRSLALRSTGDRRIGNAIEYAHKNFFTSATGSRVSEGFKQFLLV
IAAGESADGVVKASRAIKKDAVTVFAVGLNRADADEMKYISSQPHSYKLGNIPQVQQKIK
SFIDTWEDAAVARECIFDVVADIAFIVDQSSNIRSKNFQLLSYFLKNTIRGLDVGEGKIK
IAVVLYSDFPRADVFFNTFNDKTDILRYISSIPHGRGKTYTGAALKFAKEHVFTKARGSR
RDQHVQQVAVVITDGKSTDNVVSAAAALRRSGVTVFALGIKDTDEDDLREIASYPHKKFV
FSVEGFDKLHSLSNILTKTLCNEITDSIIPAALQSFVLQDCKKTIKADIYFILDESESIS
YKEFDDMKNFIKKLLEAFEVGNNHVRFGLVKFASRATTVFRLHDYNTKADIRKAVNALKI
EGGGTDLGLREMIPLFEEAVRTRGEKVHKLLIVITDGESRGTEESVEVPAKLLRTEQNVS
IYAIGVKDASVPELELISGSPQRIFYVKNYDFLDEIKKDIITEICTFEGEIFS
NT seq 3042 nt   +upstreamnt  +downstreamnt
atgggtaactcaagcatggggaaggagtggggattacttggtttccttgttctgtcatta
tgttttcttgtcagcaatggccaaaacattgtgtgtacacaggagaccatggctgacatt
gtattcctggtggatggctctgccagtatcgggctggaaaacttccaacaaatccgtgaa
tttgtttccttgcttatagagaacttagaagttgccgctgacaggatcaggatcggtctg
gtccagttcagtgacacaccgcatactgaattttcgctcaacacttaccagaacaaagag
gacattctcaggtacatccaaaatctacgttataaaaccggtgggacatttaccggccag
ggtttggagttcatgctgaaacaacactttgttgaaaaagccggaagtcgagcgcagcag
agtgttcctcagattgccattatcatcacagatggtgaatctcaagatgaggttgggtca
caggctcaggagctgaggcaaaggggaatcaaaatattcgccatagggatcaaagatgcg
aacgagactttactgagacagattgcgagcgatccgtacgatcagcacgtctacagtgtg
tcagactttgcagctctgcagggaatctctcagagtgtaatccgggaggtgtgtaccgct
gtagaggaaacacacaaagagatcatccagatgtcaagaggctgcaacgaaactgctcag
gcagacattgtgctccttgtggactcgtctggtagcattggagcgagtgattttgaagaa
gtgaggaagttcctccatgcttttgtggacagttttaatcttagacccgataaggtgaga
gtgggacttgcccagttcagtgatagaccgtaccaagagttcctgcttggtgactattta
cataagacagacttgcaccaaaagttgaatggtctcatctaccatagcggaggcaccaac
actggtcgggccctgacttttatccgtgagaattactttagcctggccagaaagagtgtt
cctggcattgtcatagtcatcacagatggagaatcaaatgatgatatggaggaaccttcc
cagagactacgaaatctgggagttttcatctttgtcatccgggtgggaatgggcaacatg
gaaaaactgcgtgccattgctaatatcccacatgaagagttcttattcagtatcgacaat
tatcaagaactgcaaggtctaaaagcgggtctatgcaacaaagtgtgctttactgtgttg
cttcagtcagaagcttttgtaccaaaatttgctgatctcttcatattggttgatagttca
gcatctagacaagagcagcaaacaataaagagttttctctcaaaactggtcacgcagctc
aatgtgggaaaggattttaatcgtgtcggcctggctcagttcagtaaaaatgtcaaagag
gagttcctgctaaatactgataagaccaagaatgagatagtgtcatctatccgtagcctg
gcactgaggtctacaggggatcgtagaattggcaatgcaattgaatatgctcataaaaat
ttcttcactagtgccaccggaagccgtgtctctgaaggatttaagcaatttctgttagtc
attgcagctggagaatccgctgatggtgtcgtcaaagcatcccgcgcaatcaaaaaagat
gcagtgacagtttttgctgttggcttgaacagagctgatgcagatgagatgaagtacatc
tctagtcaaccacacagctacaagttaggtaacatcccacaagtgcaacagaaaattaag
tctttcattgacacatgggaagatgctgcagttgcaagggagtgcatatttgacgtggtg
gcagatatcgcttttattgttgatcagtccagcaatatcagatccaaaaacttccaactt
ttaagctactttctcaagaacaccatcagaggtctcgatgtaggtgagggaaaaattaaa
atagctgtggtcctctatagtgacttccctcgagcagatgttttctttaacaccttcaat
gataagactgacatcctacgctacatcagcagcataccacatggtcgtggtaaaacatac
actggagctgctctcaagtttgccaaagagcatgtgttcaccaaagcaagaggcagtaga
agagatcagcatgttcagcaggttgctgttgttatcactgatggaaagtcaacagataat
gtggtcagtgctgcagcagcattgcgacgatctggcgtcactgtatttgcgcttggtatc
aaagacaccgacgaggatgacttgagagagattgcatcctatccacataagaagtttgta
ttcagtgttgaaggctttgataaactgcattcactttcaaatattttaaccaaaacactt
tgcaatgaaatcacagattccatcatacctgcagccttacagagctttgtgttacaagat
tgcaagaaaacaataaaagctgacatatattttattctggatgaatcagaaagcatatcc
tataaagaatttgatgatatgaagaacttcattaagaaattgcttgaagcattcgaggtt
ggaaataaccatgtgcgctttgggttggtgaagtttgcaagtcgtgcaaccacagttttc
cgattacatgactataacacaaaagctgatatcagaaaggcagtgaatgccctcaaaatt
gagggagggggcactgatctgggattgagagaaatgatcccactatttgaagaagcagta
cgaacacgtggggaaaaggttcataagctcctgattgtcatcacagatggcgagtcaaga
gggacagaagaatcggtagaagtccctgctaaacttctgagaacagaacagaatgtcagt
atttatgctattggtgtgaaagatgcatctgtaccagagctggaattaatatctggcagc
ccacaaagaatattttatgtgaaaaactatgatttccttgatgaaatcaagaaagacatt
attacagaaatatgtacctttgaaggtgagatattcagctaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (19)   

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