KEGG   Sinocyclocheilus anshuiensis: 107679599
Entry
107679599         CDS       T04917                                 
Name
(RefSeq) CCR4-NOT transcription complex subunit 1 isoform X1
  KO
K12604  CCR4-NOT transcription complex subunit 1
Organism
sanh  Sinocyclocheilus anshuiensis
Pathway
sanh03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:sanh00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    107679599
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sanh03019]
    107679599
Messenger RNA biogenesis [BR:sanh03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     107679599
  mRNA degradation factors
   3'-5' decay
    Ccr4-NOT complex
     107679599
SSDB
Motif
Pfam: Not1 CNOT1_CAF1_bind CNOT1_TTP_bind DUF3819 CNOT1_HEAT
Other DBs
NCBI-GeneID: 107679599
NCBI-ProteinID: XP_016330675
Position
Unknown
AA seq 2384 aa
MNLDSLSLALSQISYLVDNLTKKNYRASQQEIQHIVNRHGPEADRHLLRCLFSHVDFSGD
GKSSGKDFHQTQFLIQECVSLITKPNFISTLCYAIDNPLHYQKSLKPSPHLFTQLSKVLK
LSKVQEVIFGLALLNSSNADLRGFAAQFVKQKLPDLLRSYVDADLGGNQEGGFQDIAIEV
LHLLLSHLLFGQKGSSGVGQEQIDAFLKTLCRDFPQERCPVVLAPLLYPDKRDILMDRIL
PDSGELNKTMMESSLADFMQEVGYGFCASPDECRNIILQYGVREVTASQVARVLGMMART
HSGLSDGIGLQSISNPVGGGIWSDGKDKSDGSQSHTWNVEVLIDVVKEVNPNLNFKEVTY
ELDHPGFLIRDSKGLQIVVYGIQRGLGMEVFPVDLIYRPWKHAEGQLSFIQHSLMSPEVF
CFADYPCHTVAIDILKAPPEDDNREIATWKSLDLVESLLRLSEVGHYEQVKQLFSFPIKH
CPDMLVLALLQISTSWHTLRHELISTLMPIFLGNHPNSAIILHYAWHGQGQSPSIRQLIM
HSMAEWYMRGEQYDQAKLSRILDVAQDLKSLSMLLNGTPFAFVIDLAALASRREYLKLDK
WLTDKIREHGEPFIQACVTFLKRRCPSIMGGLAPEKDQPKSAQLPPETLATMLACLQSCA
GSVSQELSETILTMVANCSNVMNKARQPPPGVLPKGRAPSTSSLDAISPVQMDPLSAMGS
LSLGVTSTSHTPSIQGFPSLQGSAFSNPQSPAKAFSNLPNPNPSTAFPGINPLSSQLQGP
LSTSLTGIGSGLGMPAVSSDPFGTRKMSTPGLNPPTFQQTDLSQVWPEANQHFSKEIDDE
ANSYFQRIYNHPPHPTMSVDEVLEMLQRFKDSNIKREREVFNCMLRNLFEEYRFFPQYPD
KELHITACLFGGIIEKGLVTYMALGLALRYVLEALRKPFGSKMYYFGIAALDRFKNRLKD
YPQYCQHLASIAHFLQFPHHLQEYIEYGQQSRDPPVKMQGSITTPGSLALAQAQAQSQTP
KAPQPGLASTLVTTAITTTTAAKTTTITRPTAVGPKKDVPPSINTTNIDTLLVATDQTER
IVEPPENVQEKIAFIFNNLSQSNMTQKVEELKETVKEEFMPWVSQYLVMKRVSIEPNFHS
LYSNFLDTLKNPEFVKMVLNETYRNIKVLLTSDKAAANFSDRSLLKNLGHWLGMITLAKN
KPILYTDLELKSLLLEAYVKGQQELLYVVPFVAKVLESSLRSVIFRPQNPWTMGIMNVLA
ELHQEHDLKLNLKFEIEVLCKNLSLDISELKPGNLLRDKEKLKNLEEQLSAPKKETKPPE
ELLPIVTTDSVPFTAAPSTPATTTTCTATGPPTPQFSYHDINVYALAGLAPHINININIP
LLQAHPQLKQCVRPAIERAVQELVHPVVDRSIKIAMTTCEQIVRKDFALDSEESHMRVAA
HHMMRNLTAGMAMITCREPLLMSIATNLKNSFAAALRAPTPQQREMMEEAAARIAQDNCE
LACCFIQKTAVEKAGPEMDKRLATEFELRKHARQEGRRYCDPMVLTYQAERMPEQIRLKV
GGVDPKQLAVYEEFARNVPGFLPSNDLSQPTGFLAQPMKQQAWPTDDVAHIYDKCISDLE
QHLHAIPPALAMNPQTQAIRSLLEAVVLARNSRDGIAALGLLQKAVEGLLDATSGADPDL
LLSYRECHLLVLKALQDGRAYGPQWCNKQITRCLIECRDEYKYNVEAVELLIRNHLVNMQ
QYDLHLAQSMENGLNYMAVAFAMQLVKILLVDERSVSHITEADLFHTIETLMRTNAHSRA
NAPEGTPSLPQLMDVVRSNYEAMIDRHHGGPNFMMHSGISQASEYDDPPGLREKAEYLLR
EWVNLYHSAAAGRDSTKAFSAFVGQMHQQGILKTDDLITRFFRLCTEMCVEISYRAQAEQ
QLPTTSPAIIRAKCYHNLDAFVRLIALLVKHSGEASNTVTKINLLNKVGMLTMVLGIVVG
VLIQDHDVRQTEFQQLPYHRIFIMLLLELNAPEHVLETINFQTLTAFCNTFHILRPTKAP
GFVYAWLELISHRIFIARMLAHTPQQKGWPMYAQLLIDLFKYLAPFLRNVELNKPMQILY
KGTLRVLLVLLHDFPEFLCDYHYGFCDVIPPNCIQLRNLILSAFPRNMRLPDPFTPNLKV
DMLSEINIAPRILTNFTGVMPSQFKKDLDSYLKTRSPVTFLSELRSNLQVSNEPGNRYNI
QLINALVLYVGTQAIAHIHNKGSTPSMSTITHSAHMDIFQNLAVDLDTEGRYLFLNAIAN
QLRYPNSHTHYFSCTMLYLFAEANAEAIQEQITRVLLERLIVNRPHPWGLLITFIELIKN
PAFKFWSHDFVHCAPEIEKLFQSVAQCCMGQKQAQQVMEGTGAS
NT seq 7155 nt   +upstreamnt  +downstreamnt
atgaatcttgactcgctctcgctggctttgtctcagatcagctacctggtggacaattta
actaagaaaaactacagagccagccagcaggaaatacaacatattgtgaatcgtcacggc
cctgaggcagaccggcatttattacgctgtctcttttcccatgtggattttagtggcgat
ggtaaaagcagtggcaaagatttccaccagacacaatttctgatccaggagtgtgtgtct
cttattacgaaaccaaattttatttcaacgctttgctacgccattgacaatcccctgcac
tatcaaaagagtttgaaaccatcacctcatttatttactcagctgagtaaagttctcaag
ctaagcaaggttcaggaggtgatttttggccttgctctgctgaactccagcaacgcagac
cttcgagggtttgctgctcaatttgtgaagcagaagctccctgacctcctccgctcgtac
gtggacgcggacctcggagggaatcaggaaggtggcttccaggacattgccatagaggtt
ctgcatctgctgctctcccatcttctgtttggtcagaagggctcgagcggagtcggacaa
gagcagattgacgcgttcctcaaaacactgtgcagagatttcccgcaggagcgctgtcct
gtggtgctcgcaccactgttgtaccctgacaaacgggacattctcatggacaggatcctg
ccagactctggagaattaaataagaccatgatggagagttcacttgctgacttcatgcaa
gaagttggctatggcttttgtgcaagtcctgatgagtgcaggaacataatcctgcagtat
ggtgtgcgagaggtgactgccagtcaggtggccagagtgttgggcatgatggcccgcact
cactccgggctgtccgatggcatcggcctacaatccatctcaaatccagtgggcggtggg
atctggagtgatgggaaggacaagagtgacggctctcagtctcacacctggaatgttgaa
gttctaattgatgtggtcaaagaagtgaaccccaatctgaatttcaaagaggtgacctat
gagctggaccacccaggcttcctgatccgtgacagtaaggggcttcagatagtggtctat
gggatccagaggggtctgggaatggaggtgttcccagtggatctcatctacagaccatgg
aagcatgcagaaggacagctgtcattcattcagcactcgctgatgagtcctgaagtgttc
tgctttgccgactatccctgtcatactgttgccattgacatcctgaaggccccacctgag
gatgacaacagagaaatagccacatggaagagcttggacctagtggaaagcctcttgcgc
ctctctgaagttgggcattatgaacaggtgaagcagctcttcagcttccccatcaagcac
tgcccggacatgctagtgctggcacttctgcagatcagcacctcctggcacaccctgcgt
catgagctcatctctaccctcatgcccatcttcctgggcaaccaccccaactctgccatc
atcttgcactatgcctggcatggacagggccagtccccctccatccgccagctgatcatg
cactctatggccgagtggtacatgagaggagagcaatacgaccaggccaagctatctcgc
atcctggatgtggctcaggacttgaagtctctatcgatgctgctgaatggtactccattt
gcttttgttattgaccttgctgcacttgcctctcgccgtgaatacctcaaacttgacaaa
tggctcactgacaaaatacgagagcatggggaaccattcatccaggcatgtgtcacattc
ctgaagagacgctgtccctctatcatgggtggtttggccccagagaaagaccagccaaaa
agtgctcaacttcctcctgaaacactggctaccatgcttgcatgtctgcagtcttgtgct
gggagtgtgtctcaagagctgtcagagacaatcttgactatggtggccaactgtagcaat
gtgatgaacaaggcccggcagccgccaccaggagtcttgccaaagggacgagctcccagc
accagcagcttagatgctatctcacctgtgcagatggatcctctctctgcgatgggctct
ttgagtctaggtgtcacgtccacctcccacaccccgagcatccaaggattccccagcctg
cagggctctgccttcagtaacccccagtccccagccaaagccttctcaaacctgcccaac
ccgaaccccagcacagctttcccaggaatcaaccccctctcttctcagctccaaggtcct
ctgagtacaagcttgactgggattggctcaggtttgggcatgcccgccgtcagcagtgac
cccttcggcactaggaagatgagcacaccagggctgaacccgcccaccttccagcagact
gacctctctcaggtgtggcccgaggcaaaccagcactttagtaaggagatagacgatgag
gcaaatagctacttccagcgtatctacaaccatccgccgcaccccacaatgtccgtggat
gaggtgctggaaatgctgcagagatttaaggactcaaacatcaagcgagaacgggaagtt
tttaactgcatgctgaggaatctgttcgaggagtaccgattcttccctcagtatccagat
aaagaactgcacatcaccgcttgcctcttcggggggatcattgagaagggcctggtcacg
tacatggcgctgggcttggctttacgatatgtcctggaagccttacgcaaacctttcgga
tcaaagatgtattactttgggatcgctgcactagatagatttaaaaatagactgaaggac
tatccccagtactgtcagcacttggcatcaatagcccatttcctgcagtttccgcaccat
ttacaagagtatatagagtatggccagcagtccagagaccctcctgtgaagatgcaaggc
tccattactacccctggcagcctggctttagcccaggctcaagctcagtctcagaccccc
aaagccccacaacctggcctggccagcaccttagtgaccacagccatcacaaccaccacc
gctgccaaaaccacaaccatcacgagacctacagctgttggaccgaagaaagacgtgcca
ccttcaatcaacaccacaaacattgacaccttgttagtggctacagaccagactgaaagg
atcgttgagcccccagagaatgttcaggagaagattgcgttcatcttcaacaacttgtcc
caatcaaacatgacccaaaaggtggaggagctgaaagagactgtaaaagaagaattcatg
ccctgggtctctcagtacctggttatgaagcgtgtcagcattgagcctaacttccacagc
ctgtattctaatttcctggacacactgaaaaacccagagtttgttaagatggttctcaat
gagacgtacagaaacatcaaggtccttcttacctctgataaggcagctgctaacttctca
gatcgatcactgctgaagaatttgggtcactggcttggaatgatcaccctagctaaaaac
aaacccatcctgtacacagacctggagctgaaatctctcttgctagaggcttatgtgaaa
ggccaacaggagttactgtatgtcgtcccctttgtggccaaagtcttggaatcaagtctg
cggagtgtgatcttcagaccgcagaacccttggaccatgggcatcatgaatgtactggct
gagctccaccaggaacatgacttaaagcttaacctcaagtttgagattgaggtgctctgc
aagaatctgtctttggatatcagtgagctgaaaccaggaaacctactgagagacaaagag
aagctgaagaacttggaggagcagctctctgcaccaaagaaagagaccaagcctcctgaa
gagctgcttcctatagttacaacagattctgttccatttacagctgctccctcaactcca
gccaccaccacgacctgtacggccactgggccgcccacaccacaattcagctaccatgac
atcaatgtgtacgccctggctggcctggctccgcacatcaacatcaatattaacatccca
ctactgcaggcccaccctcagctgaaacagtgtgtaagaccagcaattgagcgtgctgta
caggaactggtgcacccagtggtggaccgatccatcaagatcgccatgaccacctgtgag
caaatagtcaggaaggacttcgcacttgactctgaggagtctcacatgcgtgtggccgcc
caccacatgatgcgtaacctgactgccggcatggccatgatcacctgcagagagccgctg
ctcatgagcatcgccaccaacctgaagaacagctttgctgcagctcttagggctcccaca
ccccagcagagagagatgatggaagaggcagctgctcgcatcgcacaggacaactgtgag
cttgcttgttgctttatccagaagacagcagtggagaaagctggacctgagatggacaag
agactagcaactgaattcgagctgaggaagcacgctcgccaagaaggccgtcgctactgt
gaccccatggtgctcacctatcaggctgagcgcatgccagagcagatcagactgaaggtt
ggtggagtagatcctaaacagctggctgtttatgaggagttcgcccgaaatgttccaggc
ttcctacccagtaacgacctgtctcagcccactggtttccttgcccaaccaatgaagcaa
caggcatggcccactgatgatgtggctcacatctacgataagtgcatttcggacctggag
cagcacctgcacgcaattccacctgcgctggccatgaacccgcagacccaggccatacgc
agccttctggaggccgttgtcttggctaggaactcccgtgatggcatcgctgccctgggc
cttttgcaaaaggctgtggagggtctgcttgatgccaccagtggtgctgatcctgatctg
ctgctaagctacagggagtgccatctgctggtgctgaaagccctacaggatggtcgtgcc
tacggcccacagtggtgcaacaaacaaatcaccagatgcctgattgagtgcagagatgaa
tacaagtacaacgttgaggccgtggagctcctcatcagaaaccacctggtcaacatgcaa
cagtatgacttacacctggctcagtccatggagaatgggctcaactacatggccgtggca
ttcgccatgcagctggtgaagatcctgctggttgacgaacgcagcgtgagtcacatcact
gaagcagatctcttccacaccattgagacgctgatgaggaccaacgctcactccagagcc
aatgctcctgaaggaacccctagtttgccccagctgatggatgttgtccgctccaactac
gaggccatgatcgatcgtcaccatggtgggccgaacttcatgatgcactctgggatttct
caagcctctgaatacgatgacccaccaggccttagagagaaggcagagtacctgctgaga
gaatgggtcaacctgtaccactcggcagctgcaggaagagacagcaccaaggcattctct
gcgtttgttggccagatgcaccagcagggcatcctgaagaccgatgacctgatcactcgc
ttcttccggctgtgcacagaaatgtgtgtggagatcagttaccgtgctcaagctgaacag
cagcttccaaccaccagccccgccattatcagggccaagtgctaccataacctggatgct
tttgttcggctcattgcgcttcttgtcaaacactctggagaggcctccaacacagtcacc
aaaatcaacctgctcaacaaggttggaatgcttacaatggttctaggcattgtggtgggt
gtattgatccaggatcacgatgtgaggcagacagagttccagcagcttccgtaccacaga
atcttcatcatgctcctgctggagcttaacgcaccagagcatgtgctggagaccatcaac
ttccagacgctcactgccttctgcaataccttccacatcctgaggccgactaaagcacct
ggttttgtctatgcttggctggagctcatctcacaccgtatcttcattgccaggatgctt
gcacataccccgcaacagaagggttggccaatgtatgcccagctgctgatagacttgttc
aaatatcttgcacccttcctaaggaatgttgaactcaacaaacctatgcaaattctctac
aagggaacacttcgtgtgctgcttgtcctgctacatgacttccccgaattcctgtgcgac
taccattatggcttctgcgacgtcatcccgcctaactgcatccagctgaggaacctgatc
ctgagtgccttcccccgcaacatgaggcttccagaccccttcacccctaatctgaaggtg
gatatgctgagtgagatcaacattgctccccgcatcctcactaacttcaccggtgtgatg
ccgtcccagtttaagaaggatcttgactcctacctcaagacccgttctcctgtcaccttt
ctttctgagctgcgcagcaacctgcaggtgtccaatgagccaggcaaccgctacaacatt
cagctaatcaatgctctggtgctgtacgttggaacccaggccattgcccacatccacaac
aagggcagcactccctccatgagcaccatcactcactcggctcacatggacatcttccag
aacctcgcagttgatctagacactgagggccgctatctgttcctgaatgcgatagccaat
cagctgcgttatccaaacagccacacacactactttagctgtaccatgctgtatctgttt
gccgaggccaacgctgaagccattcaagagcagatcaccagggtcctgctggagaggctg
attgtgaacaggccacacccgtggggtctgctcatcacctttattgagctgatcaagaac
cctgcctttaaattctggagccatgattttgtgcactgtgccccagagatcgagaagttg
ttccagtcggtggctcagtgctgcatggggcagaagcaggcccagcaggtgatggaggga
acaggtgctagttag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (7)   
   RefSeq(pep) (7)   
DNA sequence (7)   
   RefSeq(nuc) (7)   
Protein domain (5)   
   Pfam (5)   
All databases (27)   

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