KEGG   Sinocyclocheilus anshuiensis: 107681436
Entry
107681436         CDS       T04917                                 
Name
(RefSeq) LOW QUALITY PROTEIN: DNA damage-binding protein 1-like
  KO
K10610  DNA damage-binding protein 1
Organism
sanh  Sinocyclocheilus anshuiensis
Pathway
sanh03420  Nucleotide excision repair
sanh04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:sanh00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    107681436
  09124 Replication and repair
   03420 Nucleotide excision repair
    107681436
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:sanh04121]
    107681436
   03400 DNA repair and recombination proteins [BR:sanh03400]
    107681436
Ubiquitin system [BR:sanh04121]
 Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   Cul4 complex
    Adoptor protein
     107681436
DNA repair and recombination proteins [BR:sanh03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      107681436
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      107681436
SSDB
Motif
Pfam: MMS1_N CPSF_A
Other DBs
NCBI-GeneID: 107681436
NCBI-ProteinID: XP_016333226
Position
Unknown
AA seq 1132 aa
MSYNYVVTAQKPTAVNACVTGHFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGLYGK
IAVMELFRPKGESKDLLFILTAKYNACILEYKQNGDSIDIITRAHGNVQDRIGRPSETGI
IGIVDPECRMIGLRLYDGLFKVIPLDRDNRELKAFNIRLEELQVIDVQFLYGCQAPTVCF
IYQDPQGRHVKTYEVSLREKEFNKGPWKQENMEAEASMVIPVPEPFGGAIFIGQESITYH
NGDKYLAIAPPTIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEELMDGAVVLKDL
HVELLGETSIAECLTYLDNGVVFVGSRLGDSQLVKLNVDSNDQGSYVAVMETFTNLGPIV
DMCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSESGRD
TDDMLVLSFVGQTRVLMLSGEEGEETELPGFVDNQQTFFCGNVVHQQLIQITSVSVRLVT
QDSKALVSEWKEPQGKNISVASCNSTQVVLAVGRVLYYLQILTGELKQISSTEMEHEVAC
LDITPLGESAGESSICAVGLWTDISARLLKLPCFSPLHKEMLGGEIIPRSILMTTFEGSH
YLLCALGDGALFYFGLDIQTGVLSERKKVTLGTQPTVLRTFRSLSTSNVFACSDRPTVIY
SSNHKLVFSNVNLKEVNYMCPLNSEGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYES
PKRICYQEVSQCFGVLSSRVEMQDTSGTTAAVRPSASTQALSSSVSSSKLFPSSTSPHET
SFGEEVEVHSLLVVDQHTFEVLHAHQFLQNEYALSMVSCKLGRDPAIYFIVGTAMVYPEE
AEPKQGRIIVFHYTDGNRQTHPXLFSTKLLNVSLGVSTNIVAISMMSVLCFLHIRXSIHA
VCVMQVSSSSLEQLVSKPKHTLSLLKLLPFHININKTARDFNPNWMSAVEILDDDNFLGA
ENAFNLFVCQKDSAATTDEERQHLQEVGLFHLGEFVNVFSHGSLVLQNLGESSTPTQGSV
LFGTVNGMIGLVTSLSEGWYSLLLDLQNRLNKVIKSVGKIEHSFWRSFHTERKTEQATGF
IDGDLIESFLDLGRAKMQEVVSTLQMDDGSGMKREATVDEVIKIVEELTRIH
NT seq 3399 nt   +upstreamnt  +downstreamnt
atgtcctacaactacgtggtgacggcgcagaagcccacggcggtgaacgcctgcgtcacg
ggtcacttcacttctgcggaggatctgaacctgctgatcgccaagaacacgcgtctggag
atctatgtggtcactgcggagggtctgcggccggtcaaagaggtcggcttgtacggcaag
atcgcggtcatggagctcttcagacccaagggtgagagcaaagatcttctgttcattctg
accgctaaatacaacgcctgtatcctggagtacaagcagaacggagacagcatcgacatc
atcacccgcgctcacggaaacgtgcaggatcggatcggccgtccgtctgagaccgggatc
atcgggatcgtggatccggagtgtcgtatgatcggcttgcggctgtacgacgggctgttt
aaggtcattcctctggaccgtgataaccgcgagctcaaagccttcaacatccgtctggag
gagctgcaggtcatagacgtccagttcctgtacggctgccaggcgcccaccgtctgcttc
atatatcaggatcctcagggtcggcacgtcaagacatatgaggtttctctcagagagaag
gagttcaacaaaggaccctggaagcaggagaacatggaagctgaagcatcgatggtcatt
ccggtcccagagccgtttggaggagctatattcatcggacaggagtccatcacttatcac
aacggagacaaatacttagccatcgctcctccaactatcaagcaaagcaccatcgtgtgt
cataaccgcgtggatccgaacggctcgcggtacctgctgggagacatggagggccgactc
ttcatgctgctgctggagaaagaggagctgatggacggagctgtggtgctcaaagacctg
catgtggagctgctgggagagacctctatcgcagagtgtctgacgtatctggataacggt
gtggtgtttgtgggatccagactaggagattctcaactagttaagctgaatgtggacagt
aatgaccagggttcgtatgtggctgtaatggagaccttcactaacctggggccgatagtg
gacatgtgtgtggtggacctggagagacaaggacagggtcagctggtgacgtgctccgga
gcgtttaaggaaggctctctgaggataattcggaatggcattgggatccatgagcacgcc
agcatcgacctgcccggcatcaaaggtctgtggcctctccgctcagagtcgggcagagac
actgatgacatgctggttctgtcatttgttggtcagaccagggtgctgatgctgagtgga
gaggagggggaggagacggagctgccggggtttgtggataatcagcagacgttcttctgt
gggaatgtagtgcatcagcagctcatacagatcacgtcggtgtctgtgaggctggtcact
caggacagcaaggctctggtgagcgagtggaaggagcctcagggcaagaacatcagcgtg
gcgtcctgcaacagcactcaggtggttctggctgtgggtcgagtgctgtattaccttcag
atactcacaggagaactcaaacagatcagctctacagagatggagcatgaggtggcgtgt
ctggacatcactcctctgggcgagagcgcaggagagtccagcatctgtgctgtggggctc
tggaccgacatctcagcccgcctgctcaagttaccctgcttcagcccgctgcacaaagag
atgctgggcggagagatcatccctcgctccatcctcatgaccacgtttgagggcagtcat
tacctgctgtgtgcgctgggagacggggcgcttttctatttcggactggacattcagaca
ggggttttgagtgagcgtaagaaggtgactctgggcactcagcccacggttctgcgcacc
ttccgctcgctctccacatctaatgtgttcgcctgctccgaccggcccaccgtcatctac
tccagcaaccacaaactggtcttctctaacgtcaacctgaaggaggtcaactacatgtgc
ccactcaactctgagggataccccgacagtctggctctggccaacaacagcactctgacc
atcggcactatcgatgagatccagaagctccacatccgaaccgttcctctctacgagtca
cccaagcggatctgctatcaggaggtgtctcagtgtttcggagttttgtccagtagagta
gaaatgcaggacaccagcgggaccacggcagccgtgcggcccagcgccagcacacaggcg
ctctccagcagcgtcagctccagtaagctgtttcccagcagcacttctcctcacgagacg
tcgtttggagaggaggttgaggtgcacagtctgctggtggtggatcagcacacgtttgag
gtgctgcatgcgcatcagttcctgcagaacgagtacgcgctcagtatggtgtcctgtaag
ctgggcagggatcctgccatctactttatcgtcggcacggcgatggtgtatccggaggag
gcggagcctaaacagggccgcatcatcgtctttcactatacagatggtaaccgtcagaca
cacccctgattattttccacaaagttattaaatgtttctctaggtgtttctacaaacatt
gtggctatttcaatgatgagtgtactttgttttttacacatccgctagagtatacatgca
gtgtgtgtgatgcaggtttcatcctcatcattagaacagctcgtctcaaaaccgaagcat
actttgagtctcctcaagcttttaccatttcatattaatataaacaaaactgctcgtgat
ttcaatcccaactggatgagtgctgttgaaatcctggatgatgacaacttcctcggagcg
gagaacgctttcaatctgttcgtctgccagaaggacagcgcggcgactacagacgaggag
cggcagcacctgcaggaggtgggtctgttccacctgggagagtttgtcaacgtgttttca
cacggatctctggtgctgcagaatctgggcgagagctcgacgccgacacagggctcggtg
ctgttcggcacagtcaacggcatgatcggtttggtgacgtcgctgtcggagggctggtac
agtttactgctggatctacagaaccgactcaacaaagtcatcaagagcgtcggcaagatc
gagcacagcttctggaggtcgttccacacggagcgtaagactgagcaggccacagggttc
attgatggagatctgatcgagagcttcctggatctgggtcgagcgaagatgcaggaggtg
gtcagcactctgcagatggatgacggcagcgggatgaagcgcgaggcgacggtggacgag
gttattaaaatcgtggaggagctgacgcggatccactaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (14)   

Download RDF
DBGET integrated database retrieval system