KEGG   Sinocyclocheilus anshuiensis: 107689588Help
Entry
107689588         CDS       T04917                                 

Definition
(RefSeq) autophagy-related protein 16-1-like isoform X1
  KO
K17890  autophagy-related protein 16-1
Organism
sanh  Sinocyclocheilus anshuiensis
Pathway
sanh04136  Autophagy - other
sanh04140  Autophagy - animal
sanh04621  NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:sanh00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    107689588
   04136 Autophagy - other
    107689588
 09150 Organismal Systems
  09151 Immune system
   04621 NOD-like receptor signaling pathway
    107689588
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:sanh04131]
    107689588
   03029 Mitochondrial biogenesis [BR:sanh03029]
    107689588
Membrane trafficking [BR:sanh04131]
 Autophagy
  Autophagosome formation proteins
   Atg12 conjugation proteins
    107689588
 Others
  Rab GTPases of specific organelles
   Auto phagosome
    107689588
Mitochondrial biogenesis [BR:sanh03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Autophagy-related proteins
    107689588
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: ATG16 WD40 ANAPC4_WD40 Ge1_WD40 Nup160 KASH_CCD DUF4472
Motif
Other DBs
NCBI-GeneID: 107689588
NCBI-ProteinID: XP_016343104
Position
Unknown
AA seq 632 aa AA seqDB search
MASVILQSGEQMAGRRVECLWKRHVVEQLKQRDRVQRQAFEEIIHQYNRLLEKSDLQVVF
SEHLQTEKYEQQNRHDLSPGVEGGRSDSLQQEMAQMRIKHQEELTELHKKRGELAQSVIE
LNNQIQQKDKEIQSNEAKMLEYQQQISRMEGECRELRNSLADLERANQTLRDEYDALQIT
FSALEEKLRKTTEDNQELVTRWMAEKAQEANKLNAENEKDSRRRQAKLQKELADAAKEPL
PIDPDDDIEVLSEDAGKGTGETSPSRQTSRAPSRRVSQPPPPAGLLDSISNIFGLSDSVQ
PGFVPSDSRRRRSVNSFGSSPESAEVPSACADVRVPSTALHVFDAHDGEVNAVRFSPGSR
LLATGGMDRRVKLWEVVSGRCEPKGALTGSNAGITSIEFDSAGSYLLAASNDFASRIWTV
DDYRLRHTLTGHSGKVLSARFLLDNARIVSGSYDRTLKLWDLRSKVCMKTVFAGSSCNDI
VCTEQCVMSGHFDKKVRFWDIRAESIVHELELLGRVTSLDLNHDRTELLSCSRDDLVKII
DLRSNAVRQTFNAQGFKCGSDFTRVTFSPDGSYVAAGSADGVLYIWNVLTGKLDKTLDKG
HSSAINSVSWSPSGAYVASVEKGSKAVLWSDM
NT seq 1899 nt NT seq  +upstreamnt  +downstreamnt
atggcgtccgtgatccttcagtccggagagcagatggcgggacgtagagtcgagtgtttg
tggaaacgtcacgtcgtggagcagctgaagcagagagaccgagttcagcgtcaggccttc
gaggagatcatacaccagtataaccggttgttagagaagtctgatcttcaggttgttttt
tctgaacatctccagaccgagaaatatgagcaacagaacagacacgacctcagtccgggc
gtcgagggcggccgcagtgattccctgcagcaggaaatggctcagatgagaatcaaacat
caagaggagctgacagagctgcacaagaaacgaggagagttggcccagagtgtgattgaa
ctaaacaaccagattcagcagaaagacaaagagatccagagtaatgaagccaagatgctg
gagtatcagcagcagatctcccgtatggaaggagagtgtcgcgagctgcgcaactctctg
gccgatctggaacgagccaatcagacgctgcgagacgagtacgatgccctgcagatcacg
ttcagcgccctggaggagaaactacggaaaaccacagaggacaatcaggagctggtgaca
cgctggatggcagagaaagcgcaggaggccaacaaactcaacgctgagaacgagaaggac
tccaggcgcagacaggcgaagcttcagaaggaactggcggacgcagcgaaggaacctctt
cctatagacccagatgatgacatcgaagttctctcagaggatgctgggaagggaacgggt
gaaacgtcaccgagcagacagaccagtcgcgcacccagtagacgagtgtctcagcctcct
cctcctgctggcctgctggattccatctctaatatctttggcttgtctgattctgtccaa
cctggtttcgtcccatctgactccagaaggcgtcgctcggtgaattcgtttggctcgtct
cctgaaagcgcagaggtgccgtcggcctgcgctgatgtccgagttccctccactgcgctg
cacgtctttgacgcccacgatggagaagtgaacgccgtgaggttcagtcccggttcccgt
ctgcttgccacgggaggaatggaccgcagggtgaagctctgggaggtcgtttctgggcga
tgtgaacctaaaggtgcgctgacgggcagtaatgctggaatcaccagcatagagtttgat
agtgcgggctcgtatctactggctgcgtcgaatgatttcgccagcagaatctggactgtt
gatgactacagactgcggcacacactcacagggcacagcgggaaggttttatccgctcgg
tttctcctcgataacgctcggatcgtctctggcagctacgaccgaacgctcaagctctgg
gacttacgcagcaaagtctgcatgaagacggtgtttgctggttctagctgtaatgacatc
gtctgcacggagcagtgtgtgatgagcggacacttcgataagaaagttcgtttctgggac
atcagggcggagagtatcgtgcatgagctggagttgctgggacgcgttacctctttggac
ctcaatcacgaccggaccgagctgctgagctgctctcgtgacgacctggtgaagatcatc
gatctgcgcagtaatgcagtgcgacagacgtttaatgctcaaggtttcaagtgtggttca
gacttcaccagggtcacgttcagtcctgatggaagttacgtggcggccggttctgcagac
ggcgttctgtacatttggaacgttctgacggggaaactagacaaaacccttgataagggt
cacagttctgccattaattcggtgtcctggtctccatcgggggcgtacgtggccagtgtt
gagaaaggcagcaaggccgtgctctggtctgacatgtga

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