KEGG   Sinocyclocheilus anshuiensis: 107694345
Entry
107694345         CDS       T04917                                 
Name
(RefSeq) spliceosome RNA helicase DDX39B-like isoform X1
  KO
K12812  ATP-dependent RNA helicase UAP56/SUB2 [EC:3.6.4.13]
Organism
sanh  Sinocyclocheilus anshuiensis
Pathway
sanh03013  Nucleocytoplasmic transport
sanh03015  mRNA surveillance pathway
sanh03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:sanh00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    107694345
  09122 Translation
   03013 Nucleocytoplasmic transport
    107694345
   03015 mRNA surveillance pathway
    107694345
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sanh03019]
    107694345
   03041 Spliceosome [BR:sanh03041]
    107694345
Messenger RNA biogenesis [BR:sanh03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     107694345
Spliceosome [BR:sanh03041]
 Complex C
  Other components
   EJC/TREX
    107694345
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    107694345
SSDB
Motif
Pfam: DEAD Helicase_C ResIII CMS1
Other DBs
NCBI-GeneID: 107694345
NCBI-ProteinID: XP_016349517
UniProt: A0A671P1A9
Position
Unknown
AA seq 450 aa
MGENDVWVFSHSLHRMTENDVENELLDYEEDEVDAGGVGDTGLGHNDGGIAIRKEGVKGS
YVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAV
FVLATLQQLEPVTGQVSVLVMCHTRELAFQISKEYERFSKYMPSVKVAVFFGGLSIKKDE
EVLKRESPHVVVGTPGRILALSRNKSLNLRHIKHFILDECDKMLEQLDMRRDVQRMTRMT
PHEKQVMMFSATLSKEIRPVCRKFMQDPMEIFVDDETKLTLHGLQQYYVKLKDNEKNRKL
FDLLDVLEFNQVVIFVKSVQRCIALAQLLVEQNFPAIAIHRAMPQDERLARYQQFKDFQR
RILVATNLFGRGMDIERVNIAFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDETDAR
TLNDVQDRFEVNISELPEEIDISSYIEQTR
NT seq 1353 nt   +upstreamnt  +downstreamnt
atgggtgaaaatgatgtatgggtcttttcccactctctccacaggatgacggagaacgac
gttgagaacgagctgttggactatgaggaggatgaggttgatgcaggtggtgtcggagac
acaggacttggacacaacgatggtggaatagccatcaggaaagaaggggtcaaagggtca
tatgtgtccatccactcctcaggattcagagatttccttctcaaaccagaactgctgaga
gctatagtggactgtggctttgaacatccatctgaagttcagcatgaatgcattcctcag
gcgatcctggggatggatgtattatgtcaggccaagtctggaatggggaagacggctgtc
tttgtgttggctacccttcagcagctggagccagtgaccgggcaggtatcagtgttggtg
atgtgtcacacccgagagctggccttccagatcagcaaagagtacgagcgcttctccaaa
tacatgcccagtgtcaaggtggcagtgttctttggtggcttatctataaagaaggacgag
gaggttctgaagagagagagccctcatgtggtggtgggaactcctggacgcattctagct
ctgtctcgcaacaagagtctcaacctgcgccacatcaagcacttcatcctggacgaatgc
gacaagatgctggagcagcttgacatgcggcgtgatgtccagcgtatgacccgtatgacc
cctcacgagaagcaggtcatgatgttcagtgccaccctgagtaaagagatccgtcccgtc
tgcagaaagttcatgcaagatccgatggaaatttttgtggacgacgaaaccaagctgacg
cttcacggcctccagcagtactatgtcaagctgaaggacaacgagaagaacaggaagctc
tttgacctcctggacgtgttggagttcaatcaggtggtgatctttgtgaagtccgtgcag
cgttgtattgctctggctcagttgctggtggagcaaaatttccctgccattgccattcat
agagcaatgcctcaagacgaaagattagctcgatatcagcagttcaaggatttccagaga
cggatcctggtggccacaaacctgtttggccgaggtatggacatcgaaagagtcaacatc
gccttcaactacgacatgcctgaagattcagacacatacctgcacagggttgcgagggcc
ggtaggtttggaacgaaaggtctggccatcacctttgtgtcagatgagactgacgcccgc
actttgaacgatgttcaggacaggtttgaggtgaacatcagcgaacttccagaggagatt
gacatctcttcatacattgaacaaacacgataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (4)   
   Pfam (4)   
All databases (21)   

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