KEGG   Sinocyclocheilus anshuiensis: 107699008
Entry
107699008         CDS       T04917                                 
Name
(RefSeq) collagen alpha-2(V) chain-like isoform X1
  KO
K19721  collagen type V/XI/XXIV/XXVII, alpha
Organism
sanh  Sinocyclocheilus anshuiensis
Pathway
sanh04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:sanh00001]
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    107699008
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00536 Glycosaminoglycan binding proteins [BR:sanh00536]
    107699008
Glycosaminoglycan binding proteins [BR:sanh00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   107699008
SSDB
Motif
Pfam: Collagen COLFI VWC TILa
Other DBs
NCBI-GeneID: 107699008
NCBI-ProteinID: XP_016355642
Position
Unknown
AA seq 1494 aa
MGMMIFQPYRTVLFLALSVAFLQFVKCQDEGEDELSCTENGQVYTNRDIWKPEPCRICVC
DSGTILCDEVQCDEVSNCAKVVVPEGECCPVCQSDTTHSSGNGRPADRIAKGQKGEPGDV
PTVIGIRGRPGPMGPPGAPGYRGDSGPKGRPGLRGPPGYDGEPGVPGEPGEPGPSGHTPG
GELSSHMAGGFADKTGAQHAMMPGVRGEAGARGQPGPNGAPGVSGPQGPPGDVGDPGPMG
GAGQRGPEGPQGKPGEDGESGTSGSAGEMGFPGSLGARGFPGTPGPPGLKGHRGHQGPSG
LKGERGAVGSKGESGGPGAMGAPGPMGPRGMPGERGRPGPSGTPGMRGAQGNVGKPGPMG
PLGINGAPGYPGAPGMKGQAGPTGVRGPEGPQGQRGETGHQGRAGPQGQQGRMGTDGGPG
SKGPVGAAGPQGPVGLLGPNGPPGPQGSTGQPGIKGQVGDLGVPGFKGEAGPKGEPGPPG
SQGVIGPQGEEGKRGSRGDPGSVGPLGPVGERGAPGNIGFPGQDGLPGPKGAQGDRGITG
THGPKGSTGDPGRTGEPGLPGARGLTGTPGVQGAEGKPGPLGAPGEDGRPGPAGSPGTKG
PPGTMGSIGPKGFSGDPGKAGEQGSAGVPGQRGPPGKDGEVGPAGPAGPHGSAGERGEQG
PPGMHGFQGLPGPAGAPGEAGKPGDQGIHGEGGPIGQIGPRGERGIPGERGELGSPGLPG
AKGIPGAPGHDGPKGSPGPTGTVGDLGPPGLQGMPGERGISGPPGPKGERGAIGEKGSEG
TPGSDGARGLTGPIGPAGPAGPSGEKGEPGPKGPPGPPGSRAMPGSRGEPGPVGAVGFVG
PAGIDGQPGVKGPPGEPGQKGDAGSPGPQGLAGPPGPQGNIGVAGPKGGRGTQGAPGPTG
FPGSAGRVGPPGPTGPIGEPGPIGLPGKEGPPGLRGDHGPPGHQGERGHPGPAGSPGDKG
DSGEDGPPGPDGPPGPAGTTGQRGIVGLPGQRGERGMPGLPGPAGPPGKQGTSGAPGDKG
PPGPVGMPGANGPRGDPGPDGPAGSDGPPGKEGVIGAQGDRGDPGPEGATGSTGPPGSPG
PVGATGGIGKRGEPGSKGPSGPPGPAGRRGLIGPQGPRGDKGDVGDHGERGQKGHRGFAG
LQGLPGPPGTTGEQGALGIIGPSGQRGPPGPIGPPGKEGYTGQPGPMGPPGSRGVSGDIG
PEGLPGEPGPPGPPGSPGPPTAALEDLFGGPQDYDAGPPPPEFSEDEALPKSNSTSVFQA
DPGVQATLKALSSQIDSMRSPDGSRKHPARTCEDLKQCYPQKKSGEYWVDPNQGSAEDAI
KVNCNMDTGETCISAIPASIPKKSWWSSPGTKPVWFGANMNGGTYFTYGNKDQPANTVTV
QMTFIRLLSKEASQTVTYHCRNTVGYKDESTGNLKKAVILKASNDLELKAEGNNRFRYTV
LEDSCSQANGKWGKTVFEYRTQKTARLPIVDIAPVDIGGSDQEFGIDIGPVCFL
NT seq 4485 nt   +upstreamnt  +downstreamnt
atgggcatgatgatctttcagccgtataggactgtcctgtttctggctttatcagtggct
tttttacaatttgtgaaatgccaagacgaaggtgaggatgagttgagctgtacagagaac
ggacaggtgtacacaaacagagacatctggaaacctgaaccatgcaggatctgtgtttgt
gacagcgggacaatcttgtgcgatgaagtgcaatgtgatgaagtgtctaactgtgcaaag
gtagtagtcccagaaggagagtgctgtcctgtttgccagagtgacacaacacacagcagt
ggcaatggcagaccagcagacagaattgccaagggtcagaaaggagaacctggagatgtc
ccaactgttattggaataagaggtcgtcctggaccaatggggcctccaggagctccgggg
tacagaggagacagcggacccaaaggtcgacctggtctcaggggtcccccgggatatgac
ggagagcccggtgttccaggagagccaggagagccagggccctcaggacataccccagga
ggtgagttgtcttcacatatggctggaggatttgctgacaaaacaggagcccagcatgcc
atgatgcctggagttcggggagaggcaggagcaaggggacagcctgggccaaatggagca
ccaggggtgtcaggaccacaaggacctcctggtgatgtaggagatccagggccaatgggt
ggtgctggccagagaggaccagagggtcctcaggggaagcctggtgaagatggagaatca
gggacttcaggaagtgcaggagaaatgggatttccaggatctctgggagcaagaggattt
ccagggacaccagggccaccaggtttaaagggccacagaggtcatcaaggtccatctggt
cttaaaggagaacgtggagctgtgggatcaaagggtgaatctggtggacctggtgcaatg
ggtgcccctggtcctatgggtcccaggggaatgccaggagaaagaggacgcccaggcccg
agtggcacaccgggcatgcgtggtgctcaaggaaatgttgggaaaccaggtccaatgggt
cctttgggaattaatggtgccccagggtatcctggagccccaggcatgaagggtcaagca
ggacctacaggtgtgaggggtccagagggaccacagggacaaagaggagagacaggacat
caaggcagagctggaccacaaggacaacaagggcgtatgggcactgacggtggtccaggt
tccaaaggcccagtgggagctgctggtcctcagggtcctgttggtctgctgggcccaaat
ggcccaccaggacctcagggaagcactggacagcctgggatcaaaggtcaagtgggagat
ttaggtgttcctggatttaaaggagaggctggacctaaaggagaacctggtccaccagga
tcacagggagtaattggacctcagggagaagagggaaaacgtgggtccagaggagatcca
ggttctgttggcccactcggacctgttggtgagagaggggcacctggaaacataggcttc
cctggtcaagatggcctaccaggtccaaagggtgcacaaggtgaccgtggaattacagga
actcatggtcctaaaggctcgactggagatccagggagaacaggggaaccaggtctacca
ggagcaaggggtttgacaggtacacctggagttcagggtgctgaaggaaagccaggacca
ttgggtgctccaggtgaggacgggcgcccagggcctgcggggtcacctggaacaaaaggt
cctcctggaactatgggatcaataggcccaaagggttttagtggggatccaggaaaggca
ggtgagcagggatctgcaggagttcctgggcaaaggggcccaccaggcaaagatggagaa
gtaggcccagctggtccagcaggtccacatggttcagctggtgagagaggcgaacaggga
cctcctggaatgcatggcttccagggtttgccaggaccagcaggtgctcctggagaggca
ggaaaacctggtgatcagggtattcatggtgaaggcggcccaataggccaaattggacca
aggggtgaacgtggaatcccaggagaaagaggagagctgggatctcctggtttgcctgga
gccaaaggtatcccaggggcacctggtcatgatggcccaaagggtagccctgggcctact
ggtacggtaggtgatctaggccctcccggtctgcagggaatgccaggtgaaagagggatc
tctgggccacctggtccaaaaggagagagaggagctattggtgagaaggggtcagagggc
actcctggaagtgacggtgcaaggggtttgacaggcccaattggccctgcaggacccgct
ggtccaagtggtgaaaaaggagaaccaggccctaaaggaccacctggacctccaggatca
agagcaatgccaggatcccgtggtgagcctgggccagtaggtgctgtaggctttgttgga
ccggctggtattgatggtcagcctggtgtgaaaggaccaccaggggagcctggacaaaag
ggtgatgctggatctcctggccctcaagggttggccggtcctccagggccacagggtaat
attggtgtggctggaccaaagggtggtagaggaacacagggggcacctggcccaacaggt
ttccctggatctgctggaagagttggcccacctggtccaacgggtcctattggtgagcca
ggtccaattggtcttcctgggaaagagggtcctcctggtcttagaggagatcatggaccg
ccagggcaccagggagagagaggtcaccctgggcctgctggaagtcctggagacaaagga
gattctggagaagatggaccaccaggacctgatgggccaccaggtcctgctggaaccacg
gggcaaagaggaattgtgggccttcctggtcaaagaggagaacgtggaatgccaggactc
cctgggccagctggtcctccaggaaaacagggtacatcaggagccccaggagacaaagga
cctcctggcccagttggaatgcctggtgctaatggacctcggggggatcctggacctgat
ggacctgctggatctgatggtccaccaggaaaggaaggtgtcataggagcccagggtgat
cgaggagatccaggcccagagggtgcgactggatctacaggaccacctggttcccccggt
cctgtcggtgcaactggaggaattggaaagagaggagagcctggttcaaaaggaccctct
ggccctccaggccctgctggaagacgaggactcataggaccgcaaggaccaagaggagat
aagggagatgtgggtgaccatggagagagaggacagaagggtcatagaggattcgcaggc
ttacaaggtcttcctggaccacctggcacaactggagaacagggagctctaggcatcatt
ggtccaagtggacaaaggggtcctcctggacccattgggccaccaggaaaggaagggtac
actggacagcctggacctatgggtcctcctggttcaagaggagttagtggtgatattgga
ccagagggacttcctggagaacctggcccacctggccctcccggatctcctggacctccc
actgcagctttggaagatctgtttggtggacctcaagattatgatgctggtcctcctccc
ccagagttcagtgaggatgaggctctacccaagagtaactcaacaagcgtgttccaggct
gatcctggagttcaggcaactttgaaagctctgagcagccagattgatagcatgcgtagc
cctgatggtagtagaaagcatcctgccagaacttgcgaggacttgaaacaatgctaccct
caaaaaaagagtggtgaatactgggtggatccaaaccagggcagtgcagaggatgccatt
aaagttaattgcaatatggacactggagagacatgtatctccgcaatacctgccagcatc
cccaagaagtcatggtggagttccccaggaactaagcctgtgtggtttggagccaatatg
aatggaggaacatatttcacttatgggaataaagaccagccggccaacactgtcacagtt
cagatgactttcatccgtctgctctccaaagaggcatcacaaaccgtcacttaccactgc
aggaacactgtgggctacaaggatgaatcaactggaaacctcaagaaagcagtcatcctc
aaagcttcaaatgatctagagctcaaagctgagggaaataaccgctttagatacactgtc
cttgaggacagctgctcacaagcaaatggtaagtggggcaaaacggtgtttgaatacagg
acccaaaaaacagcaagactacctattgtggatattgcacctgtggacattggaggttca
gaccaggagtttggcattgatattgggcctgtgtgcttcttgtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (4)   
   Pfam (4)   
All databases (16)   

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