KEGG T04917: 107703247

Sinocyclocheilus anshuiensis: 107703247

Entry

107703247         CDS       T04917

Name

(RefSeq) tetratricopeptide repeat protein 37-like isoform X1

K12600

superkiller protein 3

Organism

sanh Sinocyclocheilus anshuiensis

Pathway

sanh03018

RNA degradation

Brite

KEGG Orthology (KO) [BR:sanh00001]
09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    107703247
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sanh03019]
    107703247
Messenger RNA biogenesis [BR:sanh03019]
Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Ski complex
     107703247

SSDB

Motif

Pfam:

TPR_2 TPR_19 TPR_1 TPR_14 TPR_11 TPR_16 TPR_17 TPR_8 TPR_12 TPR_9 ANAPC3 Fis1_TPR_C TPR_15 PknG_TPR TPR-S

Other DBs

NCBI-GeneID:

107703247

NCBI-ProteinID:

XP_016361282

Position

Unknown

AA seq 1587 aa
MRFCVLLNGNKRSSDKMSSKEVKAELKSAREAIKNKEFKEALKHCKAVLKLEKNNYNAWV
FIGVAATELQQPDQAQTAYRKATELEPEQLLAWQGLANLYEKSDQADFKAELPKIYQKLI
TLYEISDKAKYFEVSKKLVEVYQLEKNYLQVARVWRRLIQVREREAEEGLEDSQLLELWK
EMTRLLQDTVEDQDNETQQHLILAFERALQMTVDVPSEAHRSLSQDYIKCLSKLPHEVAK
LKEVCDATLSRYPTHSYPLEALSEHYIRTGDCSEEAVCCFSRLSELDPNNSQAHFGLGIK
ACQDKKYEDAIKSISLGLKCMRSSIIGWYNLALAQLKMHKYSDSATASSQGLKSSVGNSD
DWTHKLQKLKLEALVRTGREQDADEALQILTQISDAKNDPVLLALKGRAHLQKGQTEEAF
QVSAELLSSHPGSVEGLTLKGLAHVAKEQHKQAEERFLEALSGSPDNGELLFLLGRLYWS
MGEEMRRDRSKAHTHLLKAAKLDPYLGSVFRFLGHYYKEVAKDQGRARGCYKRAFELDSS
DAEAGAATVDLSMEQGDMDSALTVLQSVTERATPGSAKWAWMRRGLYHLKTGQHQQAIAD
LQAALRADPQDWVCWECLGEAYLNRRSFTAALKAFDKAHALQPTSIYSLYQTAAIKQILG
RFKEAAAEYRQISEQEDYVPALKGLGECLLALARNALDDYLDGRAVDLIQNAIHYLFRAV
KQRPDLSCLWKLLGDACTTSRTVSPNRAKVLVPGALCGMDPPDQSHTLDQRQLLTLGERC
FGRALKLMPEAPLLWCDIGLNYYHQSRLLNCLYPEDDAQSLLEKAMQCVKKAIKLDSANH
TYWNTLGVVAMAKGIGNFALAQHCFIKSVKAESNNVVAWTNLGALYLKKGNIELSHEALK
IAQSLEPLYVNCWIGQAIIAETVGSFDTMDLFRHTTELSTHTEGVKGYAYWVCSTLLDKS
NRDSELYLYNIVQMNAISAAQVALSKYTERIQTDPDAFIMLGYLNTHLQLKKQATEAYRR
AVELLQASPHTDQLSFALRGYGRALSDDGQWEEAVRIYSSTPLEELHDLIGLALTCFRIG
RLPESVQAYEKALVVASSEKEKACILTALALIQHRLGSMDHAKTLLFKCSMLKEPVPESL
QCLCALGLVHGDVTLASATLTELLKLGEPIGGAVEERCLLTCTLLALQGNFSGVHREAAR
AIHRNPGNPSLWALLSRLVPQYCPNKADGGAVAGSVACHASLTLGKRALLYSGVNQLASG
RHSGEDRRRNALKTIQRAVLLCPDDPAGWAGLMAACHTENTACLLTGSAPHREDLERAHM
TLVSEKVKSLQAEDGLLAQALEGWVLQQAVTGLKQSSQYDQAETLCSQVLSVSPEHPVVF
LMLRQVQCERLLLSEASNCVPPAVLDQLSAAVMANHTSVSAWHWLAEVYRSQGLLAQASV
AYRKSLHLASQLGDHFGKMSSLLRLTLLALMPCLQAGACVSEWKDLVLEASAEVLKMGSS
PVALLFQALLQFSIKMGARETRRLLEKIVYASASGSSETIASVARWYLLRHLHTKDDLEL
IDTLLVKATAEGDSRLVDFHRRLYPSS

NT seq 4764 nt +upstreamnt +downstreamnt
atgcgcttttgcgtcttgctgaatggaaacaaacgaagttctgacaaaatgtccagtaaa
gaagtaaaagctgaactaaaaagtgctagagaagccatcaaaaataaagagtttaaagaa
gctttgaaacattgtaaggctgttctcaaacttgagaagaataactataatgcttgggtg
tttattggagtggcagctacagagctgcagcagccggatcaggctcagaccgcctacaga
aaggccactgaactggagccagagcaactgcttgcatggcagggtttagcaaatctgtac
gaaaaaagtgaccaagcagatttcaaagctgagctgccaaagatttatcagaaacttatt
acactgtatgaaatctcagacaaagcaaaatattttgaagtgagcaagaagttggtggag
gtctatcagttggagaagaactatttacaggtggccagagtgtggaggaggttaatccag
gtgagggagagggaggcagaggaagggctggaggattcacagctgctggagctgtggaag
gagatgaccagactcctgcaggacactgttgaggatcaggacaatgagactcaacagcac
ctgatattagcatttgaaagagctttgcaaatgacggtagatgtgcccagtgaagcccac
aggagcctttcacaggattacattaaatgtctttctaagcttcctcatgaggtggccaag
ctaaaggaagtttgtgatgccacactgtcccgctatccaacacactcctaccctctagag
gctctgagcgagcactacatcagaacgggtgattgcagtgaggaagctgtctgctgtttc
agccgtctatcagaactggatccaaacaactcgcaagctcactttggtctcggtattaaa
gcttgtcaggataaaaaatatgaggatgccatcaaaagtattagtctaggactgaagtgt
atgcgctcctccatcattggctggtataatcttgctctggctcaactaaaaatgcataaa
tactctgacagtgccacagcttccagccaagggctaaagtcgagtgtggggaactctgat
gattggactcataagctgcagaagttgaaactagaggctctggtgaggacaggaagagag
caggatgctgatgaagctctgcagatccttacacagatttcagatgccaaaaatgaccca
gtgcttttagcgttgaaaggaagggctcacttgcaaaagggccaaactgaggaagcattt
caggtttcagctgagcttctgagctctcacccaggatctgtggagggtctcactctgaaa
ggactggcacatgttgctaaagaacagcacaaacaagctgaagagagatttctggaggct
ttatccggaagcccagataatggggagttgttattcctgctggggcgcctgtactggagc
atgggagaggaaatgcgaagggaccgcagcaaagcccatacacatttactcaaggctgct
aaactggacccgtatcttggttcagtgtttcgtttcctgggtcattactataaagaggta
gcaaaagatcagggcagagccagaggctgctataagagagcgtttgagctggattcctct
gatgcggaggctggagcggccactgtagacctcagcatggagcagggggacatggactca
gctctgactgttctgcagtccgtaacagagagagccactccgggctctgctaaatgggcc
tggatgaggagaggtctctaccacctcaagactggccagcatcaacaggccattgcagat
ctgcaggcggcgttgagggctgatcctcaggactgggtgtgctgggaatgtttaggtgag
gcttacctgaaccgcaggagtttcacagctgccctgaaagccttcgataaagcacatgca
ctgcagcccacttccatctacagcctctatcagaccgccgccatcaaacagatcctcggc
cggtttaaagaggctgctgcagagtacaggcagatctcagagcaggaggactatgtgccg
gcactgaaaggtctgggtgaatgcttgctagccttggctagaaatgcactggatgactat
cttgatggaagagctgtagatttgatacagaacgccatccattacctcttcagagctgta
aagcaaaggccagacctgtcgtgtctgtggaagttactaggtgatgcctgcaccacctcc
agaactgtgtccccaaaccgagccaaagtgctggtgcctggagctctatgtggaatggat
ccacctgatcagagccatacattggaccagagacagctcctcactctaggagaaaggtgc
tttggtcgtgctttgaaactgatgccggaggccccccttctgtggtgtgacatcggcctc
aactactaccaccaatccagactgctcaactgcctgtatcctgaggacgatgcacagtct
ctgctggagaaagccatgcagtgtgtgaagaaggcaatcaagcttgacagtgcaaatcac
acatattggaacaccctcggggtggtcgccatggcaaagggaataggaaactttgcactt
gcacaacactgcttcatcaaatccgtaaaagccgagtcaaataatgtggttgcgtggacc
aaccttggtgctttgtatctgaagaagggaaatatagagctctctcatgaagctttaaag
attgctcagtctctagagcctctctatgtgaactgctggatcggacaggccatcattgct
gagacagtgggcagttttgacaccatggatcttttcagacacaccacagaactgagcaca
catacggagggagtgaagggttatgcatactgggtttgctccacactgctggacaagagc
aacagagactctgagctctacctctacaacatagtccagatgaacgccatctctgcagcc
caggtggctctgagcaagtacactgagaggattcagacagacccagacgccttcatcatg
ctcggatacctgaacacacacctgcagctgaagaaacaggccaccgaggcatatcgcaga
gctgttgagttgcttcaggcgtcccctcacacagaccagctcagctttgctctgaggggt
tatggacgtgccctcagtgatgatggacagtgggaagaagcggtgcgtatttattcctcc
acaccactagaggagctccatgatctcatcgggcttgcgctcacttgtttcagaatcggt
cgcctgccagagagcgttcaggcctatgagaaagcccttgtagttgcctctagcgagaag
gaaaaagcctgtatactcactgcacttgccctgatacagcacaggctgggcagcatggat
catgccaaaacgcttctcttcaagtgctccatgctgaaagagccagtaccagagagtctg
cagtgtctgtgtgctctgggtttggttcatggtgatgttaccctggcaagtgctacgctt
actgagctgctaaaactgggggaacctataggaggcgctgtggaggagcgctgtctgctc
acttgcaccctgctggccctgcagggcaactttagcggcgtacacagggaggctgctagg
gctatacacaggaacccaggaaatccatctctctgggctcttctctccagactggtccca
cagtactgccccaacaaagccgatggaggtgctgtggccggcagtgtggcatgtcatgcc
agcttgacacttggaaagagggcgttgctgtacagtggagtgaatcaactggcctcaggc
cggcactctggtgaggacagaagacgcaatgctctgaaaacaatccagagagctgtactg
ctgtgtccagatgatcctgctgggtgggcagggctaatggccgcctgtcacacagagaac
accgcatgcttactcacaggctccgcccctcacagagaagatctggagagggcgcatatg
accctggtgtctgaaaaagtgaagagcctgcaggcagaggacgggctcttggctcaggcc
ctggagggatgggtgctgcagcaagccgtgactggactcaaacagagcagccaatatgac
caggcagagactctctgctcccaggttctgagtgtttctccagagcatcctgtggtgttc
ttgatgttaaggcaggttcagtgtgagcgcctcctgttgtctgaagccagtaactgtgtt
cctcctgcggtgctggatcagctcagtgctgcggtcatggccaaccacacatctgtatcc
gcctggcattggttggcagaagtgtaccgctctcagggtctgctggctcaggcctctgtg
gcatatagaaagagtcttcatctggcctctcagctcggtgaccactttgggaagatgagc
agcctgctccgactaaccctgctagcgctcatgccatgtttgcaggctggtgcctgtgtc
tctgagtggaaggatctggtgttggaggccagtgctgaagtcttaaagatgggcagctca
ccagtagctctgctcttccaagccttactgcagttctctataaagatgggtgccagggaa
acccgtcgcctgttggagaagattgtttatgcttcagcctcagggagctctgaaacaata
gcgtcagtggcacgttggtacctcctgcgccacctgcacaccaaagatgacctggagctg
atagataccctgttggtgaaggctacagcagaaggagacagcagactggtggatttccac
agacgcctttacccatccagctga

All links

Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (15)   
   Pfam (15)   
All databases (29)   

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