KEGG T04917: 107703873

Sinocyclocheilus anshuiensis: 107703873

Entry

107703873         CDS       T04917

Symbol

smarca4

Name

(RefSeq) transcription activator BRG1

K11647

SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]

Organism

sanh Sinocyclocheilus anshuiensis

Pathway

sanh03082

ATP-dependent chromatin remodeling

Brite

KEGG Orthology (KO) [BR:sanh00001]
09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    107703873 (smarca4)
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:sanh03021]
    107703873 (smarca4)
   03036 Chromosome and associated proteins [BR:sanh03036]
    107703873 (smarca4)
Transcription machinery [BR:sanh03021]
Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     107703873 (smarca4)
Chromosome and associated proteins [BR:sanh03036]
Eukaryotic type
  Histone modification proteins
   HDAC complexes
    REST complex
     107703873 (smarca4)
  Chromatin remodeling factors
   BAF complex
    107703873 (smarca4)
   PBAF complex
    107703873 (smarca4)
   GBAF(ncBAF) complex
    107703873 (smarca4)

SSDB

Motif

Pfam:

SNF2-rel_dom Helicase_C SnAC HSA BRK QLQ ResIII HDA2-3 Bromodomain DEAD AAA_lid_6 DUF2009

Other DBs

NCBI-GeneID:

107703873

NCBI-ProteinID:

XP_016362148

Position

Unknown

AA seq 1617 aa
MSTPDPPMGGTPRPGPSPGPGPSPGAMLGPSPGPSPGSAHGIMGPSPGPPSSGHPLPPQG
PSGYPQDNMHQLHKPMEGMHERVIPEDQRYAQMKGMGMRQGGHSGMGPPPSPLDQHSQER
DLGLRDLMKGMGMRQGGHSGMGPPPSPLDQHSQGYPSPLGGSEHAPSPVPANGPPSGPMM
PTGSGAMEGGDPQAMGQQNRSGGAGGVAGSGPSGGPPNAGGPGGAGGPTPFNQNQLHQLR
AQIMAYKMLARGQSLPDHLQIAVQGKRPMPGMQQGMPNMPPASGQGAGPPGPGGSGPGGP
NYNRPHGMVGPNMPPPGPAGVPPGLQGQPTNGPPKSWPEGPMVNAAAPASAPQKLIPPQP
TGRPSPAPPSVPPAASPVMPPQTQSPGQPMQPPMVLHQKQNRITPIQKPRGLDPVEILQE
REHRLQARISHRIQELENLPGSLAGDLRTKANIELKALRLLNFQRQLRQEVVVCMRRDTA
LETALNGKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKDY
HRSITAKIQKVTKAIATYHANTEREQKKENERIEKERMRRLMAEDEEGYRKLIDQKKDKR
LAYLLQQTDEYVANLTELVRAHKAVQALKDKKKKKKKKKPENAESGAPALGPDGEPLDET
SQMSDLLVKVIHVDSGKILTGMDAPKAGQLDAWLEVNPGYEVAPRSDSEDSGSEEEEDDE
EEQPQTSQSSSEEKKIFPDPDNEDVSEVDVRHIIEHAKQDVDDEYGNARFVRGLQSYYAV
AHAVTEKVERQSSLLVNGQLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALIT
YLMEYKRLNGPFLIIVPLSTLSNWVYEFDKWAPSVVKVSYKGSPAARRAFLPILRSGKFN
VLITTYEYVIKDKQVLAKLRWKYMIVDEGHRMKNHHCKLTQVLNTHYLAPRRVLLTGTPL
QNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKVLRP
FLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSEKDKKGKGGTKT
LMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASGKFELLDRILPKLCA
TNHKVLLFCQMTSLMTIMEDYFAYRNFKYLRLDGSTKAEDRGMLLKNFNDPSFQYFIFLL
STRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKI
LAAAKYKLNVDQKVIQAGMFDQKSSGHERKAFLQAILEHEEQDEEEDEVPDDETVNQMIA
RSEEEFDHFMRMDLDRRREEARNPKRKPRLMEEDELPTWIMKDDAEVERLTCEEEEEKMF
GRGSRQRKEVDYSDSLTEKQWLKAIEEGTLDEIEEEVRYKKTTRKRKRDRDLDLPGPATP
SSSGRSRDKDDDSKKQKKRGRPPAWGYYQSNNININHVLCSVQERIRSHKYRTLNDLEKD
VMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQKIEKEEESEGEDSEEEEEEADEGSES
ESRSVKVKIKLSRKEKVERGKGRRRTGRSWRPKPVVSDDESEEDQEEEHSPSGSEED

NT seq 4854 nt +upstreamnt +downstreamnt
atgtccactcctgacccacctatgggcgggacccctcggccgggcccttccccaggccct
gggccatctccaggggccatgttagggcctagtcctggaccctcacctggctctgcccat
ggaataatgggccccagccctgggcccccctcctcaggacatccactacctccacagggc
ccctcaggttaccctcaggacaacatgcaccagttgcacaagcccatggaaggcatgcat
gagagagtcattcctgaagatcaacgctacgctcaaatgaagggtatgggcatgagacag
ggtgggcacagtggcatggggcctccacccagtcctttggaccaacactctcaggagaga
gatttaggactgcgagatttaatgaagggtatgggcatgagacagggtgggcacagtggc
atggggcctccacccagtcctttggaccaacactctcagggctacccctctcctctgggt
ggttctgaacatgcccccagtccggtacctgctaacggccctccgtctggccccatgatg
cctactggttctggtgccatggagggcggtgacccacaggccatgggtcagcagaaccgc
agtggtggtgctggtggtgttgcaggttcaggacccagtggaggacctccaaatgcaggt
ggacctggtggagccggcgggcccactccttttaaccaaaaccagcttcaccaactgcgg
gcacagatcatggcctataagatgctggcacgcgggcaatctctacctgaccacctacag
atcgcggtgcagggaaaacggcccatgccaggcatgcagcaggggatgcccaacatgccc
cctgcctcaggacaaggagcaggaccacctggaccaggaggctccggacctgggggaccc
aactacaacagaccacatggaatggttggaccaaacatgccacctccaggacctgctggt
gttcctccaggcctgcagggacaacccaccaatggaccacctaaatcttggcctgaaggg
cccatggtgaatgctgccgcccctgcaagtgcaccacagaagctgatacctcctcagccc
acgggacgcccgtctccagcaccaccttcagttcctcccgctgcctcgcccgtcatgccc
cctcagacccaatctccaggacaaccgatgcagccacccatggtgcttcatcagaaacag
aaccgcatcacacccatccagaaaccccggggcctggacccagtggagatcctccaggag
agagagcacaggttacaggctcgtatttctcatcgtattcaggagctggagaaccttcca
ggctctctggctggagacttgaggaccaaagcaaatattgagctcaaggcacttaggctc
ctgaactttcagagacagctccgccaggaggtcgtagtgtgcatgcggcgtgacacggcc
ctagagacagcgctcaacggcaaggcctacaagcgcagcaagagacagtccctgcgtgag
gctcgtatcacagagaaactggagaagcagcagaagatcgagcaggaacgcaagcgccgt
caaaaacaccaggagtatctcaacagcatcctgcagcatgcaaaggacttcaaggattat
catcgctccatcaccgcaaagatccagaaggtgaccaaagccatagccacgtaccacgcc
aacacagagagagagcagaagaaggagaatgagcgtattgagaaggagagaatgagaagg
ctgatggctgaagatgaagagggttacaggaagctgatcgatcagaagaaggacaaacgt
ctggcttacttgctgcagcagacggacgagtatgtggccaacctcaccgagctcgtcaga
gctcataaagctgtccaggccctcaaagacaagaagaagaagaagaaaaagaagaagcca
gagaatgctgagagtggagctcctgctctgggtccagatggagagcctcttgatgagacc
agtcaaatgagtgatttactggtgaaggtgattcatgtagacagtgggaagatcctcacc
ggcatggacgctcctaaagctggacaactggatgcctggctggaggtgaatccagggtac
gaggtggccccgcggtctgatagtgaagatagcggctcggaggaggaggaagatgatgag
gaggagcagcctcagacctctcaatcttcatcagaggagaagaagatatttccagatcca
gacaatgaggatgtgtctgaggtggacgtccgtcacatcattgagcatgccaagcaggat
gttgacgatgaatacggtaatgccaggttcgttaggggcctgcagtcgtactacgccgtg
gctcacgcagtcacagagaaggtggagagacagtcaagcctgttagtaaatggacagctc
aaacagtaccagatcaaaggtctggagtggctggtgtctctgtataacaataacttgaat
ggcattctggctgatgaaatgggtttgggaaaaaccatccagaccattgcactcatcacc
tacctcatggagtacaaacgcctcaacggacccttcctcatcatcgtccccctctcgact
ctgtcgaactgggtgtacgagtttgataagtgggctccatctgtggtgaaagtttcttat
aagggctctcctgctgctcgccgcgcatttcttcccattttgcgcagcggcaagttcaac
gtgctgatcaccacttacgagtacgtcatcaaagacaagcaagtgctggccaagctccgt
tggaagtacatgatagtggatgaaggtcaccgtatgaaaaatcaccactgtaaactgact
caggtgttgaacacgcactacctggcgcctcggcgtgtgctgctcactggcacgccactg
cagaacaagctgcctgaactgtgggcgctgctcaacttcctgctgcccaccatcttcaag
agctgcagcacctttgagcagtggttcaacgctccattcgccatgaccggagagaaggtg
gacctgaacgaagaggagaccattctgatcatccgtcgtctgcacaaagtgctccgcccc
ttcctgctcaggagactcaagaaggaagtggaggcccaactgccagagaaggtggaatat
gtgatcaagtgcgacatgtcggccctgcagagagtgctgtacagacacatgcaggctaaa
ggagtgctgctcactgatggatccgagaaagacaagaagggtaaaggaggcactaagacc
ctaatgaacactattatgcagttgaggaagatttgtaaccacccttacatgttccagcac
attgaggaatctttctctgagcacttgggcttcactggaggcattgttcagggacttgat
ttgtaccgtgcctctggtaagtttgagctgctggaccgtatcctaccgaagctctgcgcc
accaaccacaaagtgctgctcttctgtcagatgacctcgctcatgaccatcatggaagac
tacttcgcctaccgcaacttcaaatacctgcgcttggacggaagcactaaggctgaggat
cgtggcatgttgctgaagaactttaatgatccgtcctttcagtactttattttcttgctg
agtaccagagcaggaggtctggggctgaacctgcagactgccgacactgttatcatcttt
gacagcgactggaaccctcaccaggatctgcaggcccaggatcgtgcccatcgtatcggg
cagcagaatgaggtgcgtgtgctgcgtctgtgcactgtgaacagcgtggaggagaagatc
ctggccgctgccaaatacaaactgaatgtggaccagaaggtcatccaggccggtatgttc
gaccagaagtcgtccggccacgagcgcaaagctttcctgcaggccatcctggagcacgaa
gagcaggatgaggaggaagatgaagtgccagatgatgagactgttaatcagatgatcgct
agaagcgaggaagagttcgatcacttcatgcgcatggatcttgaccgccgccgtgaagag
gcacgtaacccgaaacgcaaaccccggctgatggaggaggatgagctgcccacctggatc
atgaaggatgacgcagaggtggaaaggctcacctgcgaagaagaagaggagaagatgttt
ggccgtggctcccgtcaaagaaaagaagtggactacagtgactccctcacggagaaacag
tggctgaaggccattgaggaaggcacccttgatgagattgaagaagaggtgcgctacaag
aaaacgactcggaaaaggaagcgggaccgtgacctcgaccttccaggcccggccacgcct
agctccagtgggcggagcagagataaagatgacgacagtaagaagcaaaagaaacgaggt
cgtcctcctgcttggggctattatcaatctaataatattaacattaatcatgttctctgt
tctgtacaggaacgcattagaagtcataagtaccgcactctgaacgacctggagaaagat
gtcatgcttctctgtcagaacgctcagaccttcaacctggagggatcactgatctacgag
gactctatcgtgctgcagtctgtgttcaccagtgtgcggcagaagattgagaaagaggaa
gagagcgagggagaagacagtgaggaggaagaggaagaggcagatgaaggatcagagtct
gaatctcgttcagtgaaggtgaagataaagctgagtcgaaaggaaaaggtggagagagga
aagggaagacgccgaaccggacgcagttggcgccctaaacctgttgttagtgacgacgaa
agtgaggaggaccaggaagaggagcattctcctagtggcagcgaggaagattaa

All links

Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (12)   
   Pfam (12)   
All databases (23)   

Download RDF

DBGET integrated database retrieval system