KEGG   Salinispora arenicola: Sare_0311
Entry
Sare_0311         CDS       T00613                                 
Name
(GenBank) chaperonin GroEL
  KO
K04077  chaperonin GroEL [EC:5.6.1.7]
Organism
saq  Salinispora arenicola
Pathway
saq03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:saq00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Sare_0311
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:saq03019]
    Sare_0311
   03110 Chaperones and folding catalysts [BR:saq03110]
    Sare_0311
   03029 Mitochondrial biogenesis [BR:saq03029]
    Sare_0311
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:saq04147]
    Sare_0311
Enzymes [BR:saq01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.1  Enzymes altering polypeptide conformation or assembly
    5.6.1.7  chaperonin ATPase
     Sare_0311
Messenger RNA biogenesis [BR:saq03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     Sare_0311
Chaperones and folding catalysts [BR:saq03110]
 Heat shock proteins
  HSP60 / Chaperonin
   Sare_0311
Mitochondrial biogenesis [BR:saq03029]
 Mitochondrial protein import machinery
  Matrix
   Other matrix factors
    Sare_0311
Exosome [BR:saq04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   Sare_0311
  Exosomal proteins of other body fluids (saliva and urine)
   Sare_0311
  Exosomal proteins of breast cancer cells
   Sare_0311
  Exosomal proteins of colorectal cancer cells
   Sare_0311
  Exosomal proteins of bladder cancer cells
   Sare_0311
SSDB
Motif
Pfam: Cpn60_TCP1 DUF5021 CbiA
Other DBs
NCBI-ProteinID: ABV96241
UniProt: A8LYN0
Position
345675..347297
AA seq 540 aa
MAKMIAFDEEARRGLERGMNQLADAVKVTLGPKGRNVVLEKKWGAPTITNDGVSIAKEIE
LEDPYEKIGAELVKEVAKKTDDVAGDGTTTATVLAQAMVREGLRNVAAGANPMALKRGIE
TAVASVSEELLKLAKDVETKEQIASTASISAGDPSVGEIIAEAMDKVGKEGVITVEESNT
FGLELELTEGMRFDKGYISAYFMTDPERMEAVFDDPYILIVNSKISSVKDLLPILEKVMQ
SGKPLLIIAEDIEGEALATLVVNKVRGTFKSVAVKAPGFGDRRKAMLGDIAILTGGQVIS
EEVGLKLDAVNLDMVGRARKVVVTKDETTIVDGAGDAEQIQGRVNQIRAEIDKSDSDYDR
EKLQERLAKLAGGVAVIKVGAATEVELKERKHRIEDAVRNAKAAVEEGIVPGGGVALVQA
GKTAFDKLDLTGDEATGAQIVKIALDGPLRQIAVNAGLEGGVVVEHVRGIEAGHGLNAAT
GGYVDLMAAGIIDPAKVTRSALQNASSIAALFLTTEAVVADKPEKTPAAPAAPGGGEMDF
NT seq 1623 nt   +upstreamnt  +downstreamnt
atggccaagatgatcgcgttcgacgaggaggctcgccgcggcctcgagcggggcatgaac
cagctcgctgacgccgtgaaggtgaccctcggccccaagggccgcaacgtcgtgctcgag
aagaagtggggcgcccccaccatcaccaacgatggtgtgagcatcgccaaggagatcgag
ctcgaggacccgtacgagaagatcggcgccgagctggtcaaggaggtcgcgaagaagacc
gacgacgtcgccggtgacggcacgacgacggcgaccgtcctggcccaggccatggtccgc
gagggcctgcgtaacgtggccgccggcgccaacccgatggccctgaagcggggcatcgag
accgcggtcgccagcgtctcggaggagctgctgaagctcgccaaggacgtcgagaccaag
gagcagatcgcctccaccgcctccatctccgctggtgaccccagcgtcggcgagatcatc
gccgaggcgatggacaaggtcggcaaggaaggcgtcatcaccgtcgaggagagcaacacc
ttcggcctggagctcgagctcaccgagggtatgcgcttcgacaagggctacatctccgcc
tacttcatgaccgatccggagcggatggaggccgtcttcgacgacccgtacatcctgatc
gtcaacagcaagatctcctcggtcaaggacctgctcccgatcctggagaaggtcatgcag
tcgggtaagccgctgctgatcatcgccgaggacatcgagggtgaggccctggcgaccctg
gtcgtcaacaaggtccgtggcaccttcaagtccgtcgccgtcaaggctccgggcttcggt
gaccgccgcaaggccatgctcggtgacattgccatcctcaccggtggccaggtcatcagc
gaggaggtcggcctcaagctcgacgccgtcaacctcgacatggtgggccgggcccgcaag
gtcgtggtgaccaaggacgagaccaccatcgtcgatggcgccggcgacgccgagcagatc
cagggtcgggtcaaccagatccgggccgagatcgacaagagcgactccgactacgaccgg
gagaagctgcaggagcggctggccaagctggccggcggcgttgcggtgatcaaggtcggt
gcggccaccgaggtcgagctgaaggagcgcaagcaccgcatcgaggacgccgttcgcaac
gcgaaggccgccgtcgaggagggcatcgtcccgggtggtggcgtcgcgctggtgcaggcc
ggcaagaccgccttcgacaagctcgacctgaccggtgacgaggcgaccggcgcccagatc
gtcaagatcgcgctggacggcccgctgcggcagatcgccgtcaacgccggcctcgagggt
ggcgtcgtcgtcgagcacgtgcgtggcatcgaggcgggtcatggcctgaacgccgcgacc
ggtgggtacgtggacctgatggccgcgggcatcatcgacccggccaaggtgacccggtcg
gcgctgcagaacgcgtcgtcgatcgcggcgctgttcctcaccaccgaggccgtcgtggcg
gacaagccggagaagaccccggccgccccggctgctccgggcggcggggaaatggacttc
tga

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Ontology (6)   
   KEGG BRITE (6)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (3)   
   Pfam (3)   
All databases (17)   

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