KEGG   Salinispora arenicola: Sare_0508
Entry
Sare_0508         CDS       T00613                                 
Name
(GenBank) 2'-5' RNA ligase
  KO
K01975  RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
Organism
saq  Salinispora arenicola
Brite
KEGG Orthology (KO) [BR:saq00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:saq03016]
    Sare_0508
Enzymes [BR:saq01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.4  Phosphoric-diester hydrolases
    3.1.4.58  RNA 2',3'-cyclic 3'-phosphodiesterase
     Sare_0508
Transfer RNA biogenesis [BR:saq03016]
 Prokaryotic type
  tRNA spricing factors
   Other tRNA splicing factors
    Sare_0508
SSDB
Motif
Pfam: 2_5_RNA_ligase2 LigT_PEase
Other DBs
NCBI-ProteinID: ABV96437
UniProt: A8M0B6
Position
577868..578446
AA seq 192 aa
MRLFVALYPPPEAVDHLNAQVARLRVGEAAADGVGVRVADAAQAHVTLAFLAAVPTEQLM
AVEGSLDQVARWSRDSWPAPPRLRLGGGGTFGQGRSTVLWVGLRGDLAELTELGQVVRSR
LRANRLPYDEKPWHPHLTVARPGDRLPPADVAADVAALDAYGGPQWPARELVLTRSHPGH
RPTHDRLAAWPL
NT seq 579 nt   +upstreamnt  +downstreamnt
gtgagactcttcgttgccctctacccgccgcctgaggcggtcgaccacctcaacgcgcag
gtggcccggctgcgggtcggcgaagcagctgccgacggcgtcggcgtccgcgtcgcggac
gccgctcaggcacatgtcacgctcgcctttctggcagcggtgcccacagagcagctgatg
gccgtggaaggatccctcgaccaggtagcgcggtggtcccgcgactcgtggccggccccg
cccagactccgtctgggcgggggcgggacattcgggcagggccgttccaccgtcctgtgg
gtgggcctgcggggtgacctggcggagctgaccgagctgggccaggtcgtccggtcccgg
ctgcgggccaaccgcctgccctacgacgagaagccgtggcatccgcacctgaccgtagcc
cggcccggcgaccgactaccaccggctgacgtggcggccgacgtcgcggccttggatgcc
tatggtggcccgcagtggccggcgagggaactggtgctgacgcgcagccacccgggccac
cgccccacccatgaccgcctggccgcctggccgttgtga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (3)   
   KEGG COMPOUND (3)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (15)   

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