KEGG T06808: SAP2

Staphylococcus arlettae: SAP2_15950

Entry

SAP2_15950        CDS       T06808

Symbol

topA

Name

(GenBank) DNA topoisomerase 1

K03168

DNA topoisomerase I [EC:5.6.2.1]

Organism

sarl Staphylococcus arlettae

Brite

KEGG Orthology (KO) [BR:sarl00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sarl03032]
    SAP2_15950 (topA)
   03400 DNA repair and recombination proteins [BR:sarl03400]
    SAP2_15950 (topA)
Enzymes [BR:sarl01000]
5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     SAP2_15950 (topA)
DNA replication proteins [BR:sarl03032]
Prokaryotic type
  DNA Topoisomerases
   SAP2_15950 (topA)
DNA repair and recombination proteins [BR:sarl03400]
Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      SAP2_15950 (topA)

SSDB

Motif

Pfam:

Topoisom_bac zf-C4_Topoisom Toprim Toprim_4 Toprim_2 Porphyrn_cat_1 Cys_rich_CPXG HypA

Other DBs

NCBI-ProteinID:

BBK28411

Position

complement(1665502..1667568)

AA seq 688 aa
MAENLVIVESPAKAKTIEKYLGKKYKVIASMGHVRDLPRSQMGVDVDNDYEPKYITIRGK
GPVVKELKKHAKKAKNVYLASDPDREGEAIAWHLANILDLEDSNENRVVFNEITKDAVKD
SFKHPRGIEMQLVDAQQARRILDRLVGYNISPVLWKKVKKGLSAGRVQSVALRLIIDREN
EIRNFKPEEYWKIEGEFRYKKSKFNAKFLHLKNRPYKLTNKQDVETITTQLDGDQFEVTK
VTKKEKTRYPSNPFTTSTLQQEAARKLNFKARKTMMLAQQLYEGIDLKKQGTVGLITYMR
TDSTRISDQAKAEAKQYIQDTYGNTYTSNRKAKGQGDQDAHEAIRPSSTLRTPNEMKDFL
TRDQHRLYKLIWERFVASQMAPAILDTVALDLTQNDLKFRANGQTIKFKGFMTLYVEAND
DGDNKQENKLPKIDEGEMVTATNIEPSQHFTQPPPRYTEARLVKTLEELKIGRPSTYAPT
IDTIQKRNYVKNESKRFVPTELGEIVYEQVKEYFPEIIDVDFTANMETLLDKVAEGEIEW
KKVIRDFFSSFKQDVERAEEEMEKIEIKDEPAGEDCEVCGSPMVIKMGRYGKFMACSNFP
DCRNTKAIIKPIGVTCPKCKEGDVVERKSKKNRLFYGCSKYPECDFISWDKPVGRECPKC
SEYLVERKKGRSSQVVCSNCDYKEEVQK

NT seq 2067 nt +upstreamnt +downstreamnt
ttggcagaaaatttagtcatagttgaatcgcctgcaaaagctaaaaccattgaaaaatat
ttaggtaaaaaatataaagtaatagcatctatgggacatgttcgagatttgcctcgtagt
caaatgggcgtagatgtggataatgattatgaacccaaatatattacaatacgtgggaaa
ggtcctgttgtaaaagaattaaaaaaacatgctaaaaaagcgaaaaatgtttatttagca
agtgacccagaccgtgaaggtgaagctattgcttggcatttagctaatatattagattta
gaagattcaaatgaaaatcgagtagtctttaacgaaattactaaagatgcagtgaaagat
agctttaaacatccaagaggcattgaaatgcaattagtggatgcccaacaagctagaaga
atattagaccgtttagtaggttataatatatctccagtattatggaaaaaagttaaaaaa
ggtttgtctgccggaagagtacaatcggtggctttacgacttattattgatcgtgaaaac
gaaattagaaactttaagccagaagaatattggaaaattgaaggtgaatttagatataaa
aaatctaaatttaacgctaaatttttacatttaaaaaatagaccatataaattaacaaat
aaacaagatgttgaaacaataacgacacaattggatggcgatcagtttgaagtaacgaaa
gttacgaaaaaagagaaaacacgttatccatcaaatccttttactacgtctactttacaa
caagaagcagcgcgtaaattaaacttcaaagcacgtaaaacgatgatgttagcgcaacaa
ttatatgaaggtattgatttgaaaaaacaaggtacagtaggtttgattacttatatgcgt
acggattcaacacgaatttcagatcaagctaaagcagaagctaaacaatatattcaagat
acttacggtaatacgtacacatcaaatcgcaaagctaaagggcaaggcgatcaagatgcc
cacgaagctataagaccgtcaagtacattacgtactccaaatgaaatgaaagatttcttg
actagagatcaacaccgtttatataaattaatttgggaacgctttgtagcaagtcaaatg
gcaccagctattctagatacagttgctttagatttaacacaaaatgatttgaagtttcgt
gcgaatggacaaacaatcaagtttaaaggatttatgacactttacgtcgaagcaaatgat
gatggtgacaacaaacaagaaaataaattacctaaaatagatgaaggtgaaatggttaca
gctacaaatatcgaaccatcacaacatttcacacaaccaccaccacgttatactgaagca
agattagttaaaacattagaagaattgaaaataggtagaccatctacttatgcaccaacg
attgatacgattcaaaaacgtaattacgttaaaaatgaaagtaaacgttttgtaccaaca
gaacttggtgaaatagtttatgaacaagtaaaagaatacttcccggaaattatcgatgtt
gactttacagctaatatggaaacattgttagataaagttgctgaaggcgaaatcgaatgg
aagaaagtaattagagacttctttagtagttttaaacaagatgtagaacgtgctgaagaa
gagatggaaaaaattgaaataaaagatgaaccagcaggggaagattgcgaagtttgtggc
tctccaatggttataaaaatggggcgttatggtaaattcatggcatgttcgaatttccca
gattgtagaaatacaaaagctatcattaaacctattggtgttacttgccctaaatgtaaa
gaaggcgatgtagtagaacgtaaatccaagaaaaatcgcttgttttatggttgttcaaaa
tatccagagtgtgactttattagttgggacaaaccggtaggaagagaatgtcctaaatgt
agtgaatacttggtagaacgcaaaaaaggtagaagtagtcaggttgtatgttcaaactgt
gattataaagaagaagtacaaaaataa

All links

Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (8)   
   Pfam (8)   
All databases (16)   

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