KEGG   Salmo salar (Atlantic salmon): 100136942
Entry
100136942         CDS       T04363                                 
Name
(RefSeq) RH2 opsin
  KO
K04250  rhodopsin
Organism
sasa  Salmo salar (Atlantic salmon)
Pathway
sasa04744  Phototransduction
Brite
KEGG Orthology (KO) [BR:sasa00001]
 09150 Organismal Systems
  09157 Sensory system
   04744 Phototransduction
    100136942
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04030 G protein-coupled receptors [BR:sasa04030]
    100136942
G protein-coupled receptors [BR:sasa04030]
 Rhodopsin family
  Vision
   Opsin
    100136942
SSDB
Motif
Pfam: 7tm_1 Rhodopsin_N 7TM_GPCR_Srw 7tm_4 7TM_GPCR_Srv
Other DBs
NCBI-GeneID: 100136942
NCBI-ProteinID: NP_001117179
UniProt: Q6XR09
Position
ssa22:37725439..37727029
AA seq 346 aa
MQNGTEGSNFYIPMSNRTGLVRSPFLYQQYYLAPPWQYHGLAVYMFFLICFGFPINGLTL
YVTATNKKLRQPLNFILVNLAAAGMIMVLFGFTITITSAVNGYFIWGPLGCAIEGFMATL
GGEVALWSLVVLAVERYIVVCKPMGSFTFTSTHAGAGVAFTWIAAMTCAAPPLLGWSRYI
PEGMQCSCGPDYYTLAEGFNNESYVIYMFSCHFIIPVCLIAFTYGSLVLTVKAAAASQQD
SASTQKAEKEVTRMCVLMVCGFMIAWTPYATLAAYIFFNKGIAFSAQSMAIPAFFSKSSA
LFNPIIYVLMNKQFRGCMLATVGMKAEEDETSVSTSKTEVSSVGPA
NT seq 1041 nt   +upstreamnt  +downstreamnt
atgcagaacggcacagaaggaagcaacttctacattcccatgtccaaccggactgggctt
gtaaggagtccttttctataccaacagtactacttggcacctccatggcaataccatggt
cttgctgtctacatgttcttcctgatctgctttggattccccatcaacgggctgaccttg
tatgtcacagccacaaacaagaagcttcggcaaccccttaacttcatcctggtcaacttg
gctgcagctggaatgataatggtcctctttggattcaccatcaccatcacatctgctgtc
aatggctacttcatctggggaccattgggctgtgctattgagggcttcatggctacactt
ggaggtgaggttgccctgtggtctctggtagtgctggctgtcgagagatacattgtggtc
tgcaagcccatgggaagcttcacgttcacttccacccatgctggtgctggtgttgcattc
acctggatagctgctatgacttgtgctgctcccccactgcttggatggtccaggtacatc
ccagagggcatgcagtgctcatgtggacctgactactacaccttggccgaaggcttcaac
aatgaatcatatgtgatttacatgttcagctgccacttcatcatcccagtctgtttgatc
gccttcacttatggaagtcttgtcctcacagtcaaggcggctgcagcttcccagcaggac
tcagcatctacccagaaagctgagaaggaagtcactcgtatgtgcgtcctgatggtttgt
ggtttcatgatcgcctggaccccctatgccaccctcgctgcctacatctttttcaacaaa
ggaattgccttcagtgcccagtccatggctatacctgccttcttctccaagagttcagcc
ttgttcaaccccattatctatgtgttgatgaacaaacagttccgtggctgcatgctggcc
actgtagggatgaaagcagaagaagatgagacttctgtgtcaacaagcaagacagaagtg
tcttctgtgggccctgcatag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (16)   
   KEGG ORTHOLOGY (1)   
   RefGene (12)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (5)   
   Pfam (5)   
All databases (32)   

Download RDF
DBGET integrated database retrieval system