KEGG   Salmo salar (Atlantic salmon): 100194881
Entry
100194881         CDS       T04363                                 
Symbol
utp18
Name
(RefSeq) UTP18 small subunit (SSU) processome component homolog (yeast)
  KO
K14553  U3 small nucleolar RNA-associated protein 18
Organism
sasa  Salmo salar (Atlantic salmon)
Pathway
sasa03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:sasa00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    100194881 (utp18)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:sasa03009]
    100194881 (utp18)
Ribosome biogenesis [BR:sasa03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    100194881 (utp18)
SSDB
Motif
Pfam: WD40 NBCH_WD40 Pox_D5 WD40_like
Other DBs
NCBI-GeneID: 100194881
NCBI-ProteinID: NP_001133382
UniProt: B5X1E4
Position
ssa06:complement(39876765..39892527)
AA seq 521 aa
MDKVGIHSRKGRETKKRVSEPEPDYEEEVLKKHKNAQAVTVLGEEDASVKLLEELVFGAE
DDLVERLVEDREDGGATLLDDDDSSDSDVENEAQLKVQPTRTAVWKDEDDDLEEEVDMTH
RFRRDLAKSDAEAKMSKQKLQQRMKEQFQKAMGGMPSWAETKVKKKNKKKDDSDEDSDGD
DLMRKTGNFVGSSDSLPKGIIRMKKCLHANNDRPSEDRLTTVQFHPSAQVVMTAGLDQSI
SLFQVDGKTNPKIQSIHLEKFPVHKAQFSVNGEQVVATSFRNKLFYIYDMMEGKVIPVHT
VRGLREQRVKEFEVSPDGESLLLTGTSGYLHVLTMKTKEVVKSMKINGNIAGVAFSHDGS
KVFTNSEEGEVYIWDMRSSKCLNRFTDDGCVSGTSMAASKNGQYLACGSAAGVVNVYSQE
ECMRQNNPKPLKTIMNLVTSATSLRFNPTSEILAIASRADDEAARLVHIPSFTVFSNFPM
FQRKTIYRAHRLDFSPNSGFFSLANNKGHAPLFRLLHYKDF
NT seq 1566 nt   +upstreamnt  +downstreamnt
atggacaaagtcggtatacactctagaaaggggagagagacgaagaagagagtctctgag
ccagagcctgactacgaggaagaagtgttaaaaaaacacaaaaacgcccaggcagtgact
gttttgggcgaagaagatgcatctgtaaaacttcttgaagagcttgtttttggtgctgaa
gatgatcttgtggaaaggctcgtggaggacagagaggatggaggtgccacacttctggat
gatgacgattccagcgattccgatgtagagaatgaagcacagctgaaggttcagccaaca
aggacagcagtatggaaggatgaggatgatgatctggaggaagaagtggacatgacacac
cggttccgtagagacctggccaagagtgatgcagaggccaagatgtccaaacagaagtta
cagcagaggatgaaagaacagttccaaaaagcaatgggtggaatgccgtcctgggcagag
acaaaagtaaagaaaaagaataagaaaaaagatgactctgatgaagactctgatggagac
gacctgatgaggaagacgggcaactttgtgggctcatccgacagccttcccaaaggaatc
atacggatgaagaagtgcctacacgccaacaacgatcggccgtctgaggacagactgacc
acggtgcagttccacccctctgcccaggttgtcatgacagcagggctcgaccagtccatc
tctctgttccaggttgatgggaagaccaaccctaagatccagagtattcacctggagaag
ttcccggtgcacaaggcccagttcagcgtgaatggggagcaggtggtggccaccagtttc
aggaacaagctgttctacatctacgacatgatggagggcaaggtcatccctgtccacact
gtcagaggtctgagggaacagagggtgaaagagtttgaagtctcccctgatggagaatcc
ctccttctcactggcacctccggatacctccatgtgttaacaatgaagacaaaggaggta
gtgaaaagcatgaagatcaacggaaacattgcgggagtggctttttcccacgacggcagc
aaagtcttcaccaattctgaggagggtgaggtgtacatatgggacatgaggagcagtaaa
tgcctgaacaggttcacagatgatggctgtgtgagtgggacctccatggctgcatccaag
aacggacagtatctggcctgcgggtcagcggcaggtgtggtgaacgtgtactctcaggag
gagtgtatgcggcagaacaaccccaagcctctgaagaccatcatgaacctggtgacctct
gccacctctctccgcttcaaccccacctccgagatcctggccattgcctccagggctgac
gacgaggctgcccgattggttcatatccccagcttcacagtgttctccaacttccccatg
ttccagaggaaaaccatatacagggcccaccgcctggacttctccccaaacagcggcttc
ttctctctggccaacaacaagggccatgcccctctcttcaggttgttgcattacaaagac
ttttga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (26)   
   KEGG ORTHOLOGY (1)   
   RefGene (22)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (4)   
   Pfam (4)   
All databases (41)   

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