KEGG   Salmo salar (Atlantic salmon): 100380279
Entry
100380279         CDS       T04363                                 
Symbol
hakai
Name
(RefSeq) E3 ubiquitin-protein ligase Hakai
  KO
K15685  E3 ubiquitin-protein ligase Hakai [EC:2.3.2.27]
Organism
sasa  Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:sasa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sasa03019]
    100380279 (hakai)
   04131 Membrane trafficking [BR:sasa04131]
    100380279 (hakai)
   04121 Ubiquitin system [BR:sasa04121]
    100380279 (hakai)
Enzymes [BR:sasa01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     100380279 (hakai)
Messenger RNA biogenesis [BR:sasa03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    N6-methyltransferase complex
     100380279 (hakai)
Membrane trafficking [BR:sasa04131]
 Endocytosis
  Clathrin-mediated endocytosis
   Ubiquitin E3 ligases
    100380279 (hakai)
Ubiquitin system [BR:sasa04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    100380279 (hakai)
SSDB
Motif
Pfam: zf_Hakai zf-C3HC4 zf-C3HC4_2 zf-RING_UBOX zf-C3HC4_3 zf-RING_2 Zap1_zf1
Other DBs
NCBI-GeneID: 100380279
NCBI-ProteinID: NP_001167035
UniProt: C0H8T4
Position
ssa10:complement(92776082..92779340)
AA seq 485 aa
MYQNDTDLQGTDGSIILEGHDVRRRIPIKLISKQPVRSKAVNHSQRPLSRLPSKTQPNDE
EGFGFKQEDRFERKSGDALGNQRRFPQPMFWDYKLNLVGEKDDTPVHFCEICGLPIKLYG
RMIPCKHVFCYDCALLHEKKMEKMCPGLTLYSCTDPVQRIEQCLRGLLYMCSIVPGCKRT
YLSQRDLQAHVNHRHIRAAKAAGGGILPCLEPLHPQLASEPPDHFRLLPLPHLAKGHPLI
PPQLQGHDPYGQPPPASPSTPSELGPSGLHRPPLGQEMFHIATLTTRKHSNLITVPIQDD
SGESPLPQPTQGMPPPHPHQGDYPGQPHHLMALPPQQQHYGPPPQPPPTLSHPMQHLPQG
PGTPHLVYNQVPPMSSGLPPITPPPGHIMGQMPPYMNHPPPPGPLPQHGGPPVNTPPPHH
YNPSSMQQDRGTVSPPFNQPGGLSPGMWPAPRGTHPSRMQRPPPHGQMPGPPQLPDQSRY
RSYYQ
NT seq 1458 nt   +upstreamnt  +downstreamnt
atgtaccaaaatgacactgatctacaaggcactgatggttcaatcattctggagggccat
gatgtacgcagacggatcccgattaagctgatatccaagcagccagtcagaagcaaggct
gttaaccactcacaaagacccttaagcagactgccctccaaaacccagcctaatgatgaa
gagggctttgggttcaagcaggaagatagatttgagcgcaagtctggagatgcgttaggc
aaccagaggaggttccctcagcccatgttctgggactacaaactgaatctggttggcgag
aaggacgacacgccagttcatttctgtgagatatgtggccttcccataaagctctatgga
cgcatgattccctgcaagcatgtattttgctatgattgtgccctgctccatgagaagaag
atggaaaagatgtgtccaggtctcaccctatacagctgcacagatccggtccagcggatt
gagcagtgcctgcggggcctcctctacatgtgcagcatcgttccgggctgcaagcgcacc
tacttgtcccagcgcgacctgcaggcccatgtcaaccaccgacacataagggcagccaag
gctgcaggagggggcattctaccatgcctagagcccttgcatccacaactggcctcagag
ccacctgaccactttcgtctgctaccactgccccacctggccaaaggacaccccctcata
cccccacagctgcagggacacgacccctatggccagccccctcccgcctcgccgtcaacc
ccctctgaactgggcccctctggcctccatcgccccccactgggtcaggagatgttccac
attgccacgttgactactcgcaagcacagcaacctcatcactgtgcccattcaggatgac
tctggggagtcgccccttccccagcctacccagggaatgccccctccccacccccatcag
ggagactaccctggccagccccaccacctgatggccctcccaccccagcagcagcactac
ggcccaccccctcagccgccacccaccctcagccaccctatgcagcaccttcctcagggc
cccggtacgcctcatctggtctacaaccaggtccctcccatgtcctcaggcctgcctcct
atcaccccaccacctggacacatcatgggccagatgcctccctacatgaaccacccacct
cccccaggccccctgccccaacacggtggtcctcctgttaacacgccccctccccaccac
tacaatccaagctccatgcagcaggatcggggcactgtcagcccgccctttaaccagccc
gggggactgagcccagggatgtggccagcccccaggggcactcacccgtcccgcatgcag
cggcccccaccccatggccagatgcctggtcctccccagctcccagaccagtcccgctac
cgctcttactatcagtaa

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (55)   
   KEGG ORTHOLOGY (1)   
   RefGene (51)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (7)   
   Pfam (7)   
All databases (76)   

Download RDF
DBGET integrated database retrieval system