KEGG   Salmo salar (Atlantic salmon): 100380851
Entry
100380851         CDS       T04363                                 
Symbol
pgfrb
Name
(RefSeq) platelet-derived growth factor receptor beta
  KO
K05089  platelet-derived growth factor receptor beta [EC:2.7.10.1]
Organism
sasa  Salmo salar (Atlantic salmon)
Pathway
sasa04010  MAPK signaling pathway
sasa04020  Calcium signaling pathway
sasa04510  Focal adhesion
sasa04540  Gap junction
sasa04810  Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:sasa00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    100380851 (pgfrb)
   04020 Calcium signaling pathway
    100380851 (pgfrb)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    100380851 (pgfrb)
   04540 Gap junction
    100380851 (pgfrb)
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    100380851 (pgfrb)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01001 Protein kinases [BR:sasa01001]
    100380851 (pgfrb)
  09183 Protein families: signaling and cellular processes
   04090 CD molecules [BR:sasa04090]
    100380851 (pgfrb)
Enzymes [BR:sasa01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.10  Protein-tyrosine kinases
    2.7.10.1  receptor protein-tyrosine kinase
     100380851 (pgfrb)
Protein kinases [BR:sasa01001]
 Receptor tyrosine kinases (RTK)
  PDGFR family [OT]
   100380851 (pgfrb)
CD molecules [BR:sasa04090]
 Proteins
  100380851 (pgfrb)
SSDB
Motif
Pfam: PK_Tyr_Ser-Thr Pkinase Ig_3 I-set ig Ig_2 V-set VEGFR-1-like_Ig-like C2-set_2
Other DBs
NCBI-GeneID: 100380851
NCBI-ProteinID: XP_014051430
UniProt: A0A1S3RGM0
Position
ssa04:complement(32424711..32450884)
AA seq 1109 aa
MWRGTLPRVLSIHTGTMELGLAKSLPLVAIFAVLLQFCPEGFSLELSPSEKEVILSTNSS
FTVVCSGWSKVTWKSPHDPSLEGVAVEDRGTTSVLVLHNVTWRHSGNYICEEPSTQEAKD
ISVFVPDPEEWFLPLRQAVVMKEGEEGTIPCMVTDPGINVTLYERDNKASVEGTYHPSKG
FTAILKDSSYICRGAMNEEEKASQVYYVYSIVVPKSMNAFMTLSKTVLKQGEALMVNCTV
EEAEIVYFEWDFPRKETIEPLTDFLSEIRIRSFLNISSVTLEDSGQYICRVQDPFSGKSA
MDNLTVTVLERGFVDLEPSINTNVSALQYQSVELKVQIEAYPKPQVLWTRDNTTLTGETV
SMDTRQVHETSYLSTLTLVRVRMEQRGLYTVQVANEDDVKEITFDLQVKSPPKIIDLSDQ
HMDQGHGVLCVTEGVPTPTIHWYSCESIGKCSNKTTAWKSLSADQDNVSIQMNVSYIEAS
GVNHVRSLLTFQTMGGITSVRCEARSERGRRAWDIKLVSNSLFSQVAVLAAVLALVVIAV
IFLIILIALWRKKPRYEIRWKVIESVSSDGHKYTYMDPMHLPYDCVWEVPRDSLVLGHTL
GSGAFGRVVEATAYGLRHSQSTTKVAVKMLKSTARTSETQALISELKIMSHLGPHLNIVN
LLGACTKRGPIYLITEYCCYGDLADYLHRNKHTFLQYYADKNRRDADMCRNSTESTVQIQ
GKSESDGGYMDMTKEESLNYVPMQELSDNIKYADIEPSVNETPYHQDNNYQGQGQERADV
PLSISDSPILSYTDLVGFSYQVAKGMDFLASKNCVHRDLAARNVLICEGKLVKICDFGLA
RDVMNDSNYIAKGNTFLPLKWMAPESIFQNLYTTLSDVWSFGILLSEIFTLGGTPYPDIP
MNEQFYAALKRGYRMPKPAHATDEIYDVMCKCWDEKFKKRPLFSSLVNLTGKLLTDAYKK
KYTQVNESFLKSDHHAAIRSKPIPAGNPAVSSDDHSSGDRAGQETGETGEIGETGKEAGP
SQTDYIIAIPDIHVVEEAEAGGEVLDTATQSTSSPPSTIDQTDTDTASLDGPEASLEEPV
PTEEEVPPPTQEDKLPQSPCTPEVEESFL
NT seq 3330 nt   +upstreamnt  +downstreamnt
atgtggagaggaactctcccaagagtgttatcaattcacactggcactatggagttgggc
ttggcaaagtctctgcctttggtggccatctttgcagtgctgctgcagttttgtccagag
ggcttcagtctggagctcagccccagcgagaaagaggtcatactgagcaccaactcctcc
ttcacggtggtctgttctggttggagcaaggtgacgtggaagtctccccacgaccccagc
ctggagggagtggctgtggaggacaggggaaccaccagtgtgctggtcctccacaacgtc
acctggaggcactctgggaactatatctgtgaagagccctctacacaggaggccaaggac
atatcggtgtttgtaccagaccctgaggaatggtttcttcccctgcggcaagcagtagtg
atgaaggagggagaggaaggtaccattccctgcatggtgactgaccctggcattaacgtg
accctgtacgagagggacaacaaggcctctgtggagggaacataccaccccagtaaaggg
ttcaccgccatcctgaaagatagctcctacatctgccgaggtgccatgaacgaagaggag
aaggcgtcccaggtgtattatgtctacagcattgtggtccccaaatccatgaacgccttc
atgacactctcaaagactgtgctgaaacaaggcgaggccttaatggttaattgtactgta
gaagaagcagagatagtttacttcgaatgggattttcctcgtaaagagacaattgagcca
ctgacagactttctatcggagattagaatccgctccttcttgaacatctccagtgtcact
ctggaggactctggccagtacatctgccgagtgcaggaccctttttccggaaagtcagcc
atggataatctcactgtcactgttctggaacggggctttgtagatttggaaccctccatc
aacactaatgtttcagcgctgcagtatcagagcgttgagctcaaagtgcagattgaagca
tatcccaaacctcaggtgctctggaccagagacaacaccacccttactggggaaactgta
tccatggacaccagacaggtgcatgagaccagttacctcagtactctgaccttggtaagg
gtcaggatggaacagaggggcctctacactgtccaggtggccaatgaagacgacgtcaag
gagataacctttgatcttcaagtcaagtctcccccgaagataatagatttgtctgaccag
catatggaccagggccacggtgtgctctgtgtcacagagggggttcccacacccaccatt
cactggtacagctgtgaaagcattggaaaatgcagtaataagaccacagcgtggaagtct
ctgtcggctgaccaagacaacgtcagcatccagatgaacgtgagctacatcgaggcctca
ggggtcaaccatgtccgcagccttttgaccttccagaccatggggggtattacatcagtg
cgctgtgaagcccgcagcgagagagggcgcagggcctgggacatcaaactggtctcgaac
tctctgttctcccaggtggctgtcttggctgcagtgttagccctggtggtcattgccgtc
atcttcctcatcatcctcatcgccctttggagaaagaagccccggtatgagatccgttgg
aaggtgatcgagtcagtgagctcagatggccataagtacacctacatggaccccatgcac
ctgccatatgactgtgtatgggaggtgccccgggacagcctggtcctgggtcacactctg
ggttctggagcatttgggagggtcgtggaggccacagcctatggccttcgtcactctcag
tccaccaccaaagtggctgtgaagatgctcaagtccacagcaaggacaagtgagactcag
gctctgatatctgagctgaagataatgagtcaccttgggccccatctaaacatcgtcaac
ctactgggggcttgtacgaaacgaggtcctatttacctcataactgagtactgttgctat
ggtgacctggctgactaccttcaccgcaacaagcataccttcctgcagtactatgcagac
aaaaaccgcagggatgctgatatgtgcaggaacagcacagagagtacagtccaaatccaa
ggaaaaagtgagagcgatgggggttacatggacatgaccaaggaagaatctttaaattat
gtcccaatgcaagagctgagtgacaacatcaagtatgcagacatcgagccttcagtcaat
gagacaccctaccatcaggacaacaactaccaaggacaaggccaagagagagcagacgtc
ccgttgtctatcagtgactccccaattctgagctacacagatctggtgggctttagctac
caagtggctaagggcatggactttctggcgtccaagaattgtgttcatcgtgacctggct
gcaagaaacgttctcatctgcgagggaaagctggtgaagatctgtgactttggcctggcc
cgtgatgtcatgaatgactccaactacatagccaaaggcaacacattcctgccactgaag
tggatggctccagagagtatcttccagaacctctacacaaccttgagcgatgtttggtct
tttggcattctgctttcagagatctttactctaggaggaacgccctatcctgacattccc
atgaacgaacaattctacgctgccttgaagagaggctacaggatgcccaaacccgctcac
gctacagacgagatctatgacgtcatgtgcaagtgttgggatgagaaattcaagaagagg
ccactgttctcctctctggttaatttgacgggaaagctgctgactgatgcttacaaaaag
aaatacacccaggtgaatgagagctttctgaagagcgaccaccacgctgcgatcaggtcc
aaacccataccggcagggaacccggctgtgtcttcagatgaccactcctcaggggatcga
gcgggtcaggagacaggggagacgggggagataggggagactgggaaggaggctggcccc
tcccagactgactacataatcgccatcccagatatccatgtagtcgaagaggcagaagca
ggtggtgaggtgctggacaccgccacacagagtacatcaagtcctccaagcacaatcgac
cagacagatactgatacagcctccctggatggaccagaagcatccctagaagaaccagta
cccacagaggaagaggtgcctccccccacgcaagaagacaagctcccccagtctccatgt
acccctgaagtggaggagagtttcctgtag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (5)   
   KEGG PATHWAY (5)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (21)   
   KEGG ORTHOLOGY (1)   
   RefGene (17)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (9)   
   Pfam (9)   
All databases (46)   

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