KEGG   Salmo salar (Atlantic salmon): 106564683
Entry
106564683         CDS       T04363                                 
Name
(RefSeq) intraflagellar transport protein 56
  KO
K19685  intraflagellar transport protein 56
Organism
sasa  Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:sasa00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:sasa03037]
    106564683
Cilium and associated proteins [BR:sasa03037]
 Primary cilia and associated proteins
  Other primary cilia associated proteins
   106564683
SSDB
Motif
Pfam: TPR_19 ANAPC3 TPR_16 TPR_2 TPR_1 TPR_14 TPR_8 TPR_6 TPR_9 Coatomer_E SRP_TPR_like
Other DBs
NCBI-GeneID: 106564683
NCBI-ProteinID: XP_013986399
UniProt: A0A1S3L7D5
Position
ssa12:19810273..19818104
AA seq 558 aa
MILSRVKPAVGGDSAASVSEKKKKNKAKKSPRLEEYLNQRDYLGAQTLLEFQRDVGEKEE
HADLWIGYCAFHLGDYKRAMEEYRALTLRLEEPGEVWVYLACTQFFLGLYREAEEAANKA
PKCALQNRLLFHLAHKFNDEKKLMGFHQNLEDVTEDQLSLASIHYMRSHYQEAIDIYKRI
LLQNRDFLALNVYVALCYYKLDYYDVSQEVLAVYLQSIPESTIALNLKACNHFRLYNGKA
AEAELKNLIDISSCSFEFAKELIRHNLVVFRGGEGALQVLPPLIDVISEARLNLVIYYLR
QDDVQEAYTLIKDLEPTTPQEYILKGVVNAALGQEIGSRDHLKIAQQFFQLVGGSASECD
TIPGRQCMASCFFLLRQFEDVLIYLNSVKSYFYTEDTFNFNYAQAKAALGNYKEAEEIFL
LIQGEKMKTDYVYLSWLTRCYIMNQKGRLAWELYLKMGASPDSFSLLQLIANDCYKMGQF
YWAAKAFDTLEKLDPDSNYWEGKRGACVGIFQLILAGREPKETLKEVLPLLRSTQNPQVE
YIIRALRKWAKDNRVPLT
NT seq 1677 nt   +upstreamnt  +downstreamnt
atgattctgtcccgggtgaagccagcagtaggtggagattctgcagctagcgtcagtgag
aagaagaagaaaaacaaagccaagaagagccctcgcctggaggaatacctcaaccagaga
gactaccttggggcacaaactctgttagagtttcagcgagatgttggagaaaaagaggag
catgcagacctttggattggctactgtgcctttcacttgggtgattacaagagagcaatg
gaggagtacagggccttgacactccggttagaagaaccaggggaagtgtgggtgtatctg
gcctgcactcagtttttcctggggctctacagagaggcagaggaggctgcaaacaaggct
ccaaagtgtgcacttcagaatcgcctactcttccacctggctcacaagttcaacgatgag
aagaagctgatgggtttccaccagaacctggaggatgtgactgaggaccagctgagcctg
gcctccatccactacatgagatcacactaccaggaggccatcgacatctacaaacgcatc
ctgctacagaatagagatttcctggctcttaacgtgtacgtagcgctgtgctactacaag
ttggactactatgatgtttcccaagaggtgttagctgtgtatctgcagagtattcctgaa
tccaccatcgctctcaacctcaaggcctgcaaccacttcaggctgtacaacggcaaggca
gctgaggctgagttaaagaacctcatagacatctcctcctgttcctttgagtttgctaag
gagcttatccggcataacctggtggtgtttcgtggtggggagggggcgttgcaggtgctg
cccccgttgattgatgtcatctctgaggctcggttgaacctggtcatctactacctcaga
caagatgatgttcaagaggcttacaccctgataaaagacttggagccaaccacaccacag
gagtacattttgaaaggagtggtgaatgccgctttgggtcaagaaattggatcgagggat
cacctgaagattgctcaacagttcttccagctagtcggaggctcagccagcgaatgcgac
acgatacctggaagacagtgtatggcttcctgtttcttccttctgaggcagtttgaagac
gttctcatctacctcaactcagtcaagagttacttctacaccgaggatacgttcaatttc
aactatgcccaggccaaagctgccttgggaaactacaaagaagcagaggagatatttctg
ctgatccagggtgagaagatgaagactgactatgtatatctgagctggctgactcgctgc
tacatcatgaaccagaaaggccggctagcctgggagctgtatctgaagatgggggcttcg
ccagactccttcagcctcctacaactcattgccaatgactgctataagatgggtcagttc
tactgggcagccaaagcgttcgatactctggagaaactggatcccgactccaactactgg
gagggcaagagaggggcttgtgtcggaatcttccagctcatattggcaggcagagagcca
aaggaaaccctgaaggaggtgctgcccctgttgaggagcacacagaacccccaggtggag
tacatcatcagagctctgaggaaatgggccaaagacaacagggttcctctgacatag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (5)   
   RefSeq(nuc) (3)   
   GenBank (1)   
   EMBL (1)   
Protein domain (11)   
   Pfam (11)   
All databases (33)   

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