KEGG   Salmo salar (Atlantic salmon): 106566836
Entry
106566836         CDS       T04363                                 
Symbol
TNNC1
Name
(RefSeq) troponin C, slow skeletal and cardiac muscles-like
  KO
K05865  troponin C, slow skeletal and cardiac muscles
Organism
sasa  Salmo salar (Atlantic salmon)
Pathway
sasa04020  Calcium signaling pathway
sasa04260  Cardiac muscle contraction
sasa04261  Adrenergic signaling in cardiomyocytes
sasa04814  Motor proteins
sasa04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:sasa00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04020 Calcium signaling pathway
    106566836 (TNNC1)
 09140 Cellular Processes
  09142 Cell motility
   04814 Motor proteins
    106566836 (TNNC1)
   04820 Cytoskeleton in muscle cells
    106566836 (TNNC1)
 09150 Organismal Systems
  09153 Circulatory system
   04260 Cardiac muscle contraction
    106566836 (TNNC1)
   04261 Adrenergic signaling in cardiomyocytes
    106566836 (TNNC1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:sasa04812]
    106566836 (TNNC1)
Cytoskeleton proteins [BR:sasa04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Troponins
     106566836 (TNNC1)
SSDB
Motif
Pfam: EF-hand_7 EF-hand_1 EF-hand_8 EF-hand_6 EF-hand_5 EF-hand_9 AIF-1 EF-hand_4 SPARC_Ca_bdg RNA_pol_Rpb4 DUF1707 DUF5580_M Dak2 EFhand_Ca_insen
Other DBs
NCBI-GeneID: 106566836
NCBI-ProteinID: XP_013990768
UniProt: B5X7T1
Position
ssa13:26334536..26338025
AA seq 161 aa
MDDVYKAAVENLTEEQKNEFKAAFDIACQGAEDGCISTKELGKVMRMLGQNPTPEELQEM
IDEVDEDGSGTVDFDEFLVMMVRCMKEESKGKSEEELAELFRMFDKNGDGYIDLEELKTM
LESTGEAITEDDIEELMKDGDKNNDGKIDYDEFLEFMKGVE
NT seq 486 nt   +upstreamnt  +downstreamnt
atggatgatgtatacaaagcagcggttgagaacttaacagaagagcagaaaaatgagttt
aaggcagcctttgacattgcatgtcagggtgcagaggacggctgcatcagcaccaaggag
ttggggaaagtgatgagaatgctggggcagaaccccaccccagaggagctgcaggagatg
atagatgaagtggatgaggatggcagcgggacagtagactttgatgagttcctggtgatg
atggtgcgctgcatgaaggaggagagcaaaggaaaatcagaggaagagttggctgaactt
ttccgcatgtttgacaaaaacggagatggctacattgatttggaggaactgaaaaccatg
ctggagtcaactggagaggccatcactgaggatgacatcgaagagctcatgaaggatgga
gacaaaaataatgatggaaaaattgattatgatgagttcctggaattcatgaagggggtt
gagtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (5)   
   KEGG PATHWAY (5)   
Genome (1)   
   KEGG GENOME (1)   
Gene (49)   
   KEGG ORTHOLOGY (1)   
   RefGene (45)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (11)   
   RefSeq(nuc) (1)   
   GenBank (5)   
   EMBL (5)   
Protein domain (14)   
   Pfam (14)   
All databases (84)   

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