KEGG   Salmo salar (Atlantic salmon): 106567449
Entry
106567449         CDS       T04363                                 
Name
(RefSeq) cytoplasmic polyadenylation element-binding protein 4-like
  KO
K02602  cytoplasmic polyadenylation element-binding protein
Organism
sasa  Salmo salar (Atlantic salmon)
Pathway
sasa04114  Oocyte meiosis
sasa04914  Progesterone-mediated oocyte maturation
Brite
KEGG Orthology (KO) [BR:sasa00001]
 09140 Cellular Processes
  09143 Cell growth and death
   04114 Oocyte meiosis
    106567449
 09150 Organismal Systems
  09152 Endocrine system
   04914 Progesterone-mediated oocyte maturation
    106567449
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sasa03019]
    106567449
Messenger RNA biogenesis [BR:sasa03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    eIF4F and regulatory proteins
     106567449
   Factors involved in mRNA localization
    Trans-acting binding proteins
     106567449
   mRNA cycle factors
    P-body specific factors
     106567449
SSDB
Motif
Pfam: RRM_7 CEBP_ZZ RRM_1 zf-U1
Other DBs
NCBI-GeneID: 106567449
NCBI-ProteinID: XP_013992195
UniProt: A0A1S3LMK8
Position
ssa13:51291277..51318418
AA seq 709 aa
MGDYGFGVLVQNNTGNKSAFPVRIHPHLQPPHHHQNASQNPGAFINSTTAGNGSNNGSPW
LFSATAAHGSMQDEILGSEKPKAQQQEMQETQEKQLLSPGHPESGIVSELEKARSEENKV
EGGPSEGSNGKEKLRLESPVLTGFDYQETSGLGTPCQSSTSSSLTGFNNWSAAISQTPST
IINEDVSFFNPAASANNGPLLFQNFSHHVSPGFGGNFSPQIGPISQHHPPHPHFQHPHNQ
HQQHRRSPASPHPPPFPHRNAAFSQLPHLSNNLNKPPSPWGSYQSPSPSPSSTSWSPGGG
YGGWGGSQGREYRRGLNGGMTPLNSISPLKKTFPNNHVPSQKYSRTSPGFNPKSWMDESV
SRSENIFPFQERTRSFDGFNMHSLENSLIDIMRAEQDTLKARNYGRRRVHSSLFPMEDGF
PDDERGEQSLPGLGSPHCFPHQNGERVERYSRKVFVGGLPPDIDEDEITASFRRFGHLFV
DWPHKAESKSYFPPKGYAFLLFQDESSVQALIEACIEEDGKLYLCVSSPTIKDKPVQIRP
WNLNDSDFVMDGSQPLDPRKTIFVGGVPRPLRAVELAMIMDRLYGGVCYAGIDTDPELKY
PKGAGRVAFSNQQSYIAAISARFVQLQHGEIDKRVEVKPYVLDDQLCDECQGTRCGGKFA
PFFCANVTCLQYYCEYCWAAIHSRAGREFHKPLVKEGGDRPRHISFRWN
NT seq 2130 nt   +upstreamnt  +downstreamnt
atgggggattacgggtttggagtcttagtgcaaaataacactggcaacaagtctgctttc
ccagttagaattcatccacatctgcaacctccacaccatcatcagaatgcgtctcaaaac
cctggtgcttttataaacagtaccacagctggtaatggcagtaacaatgggtcaccttgg
ctgttttcagccacagctgcccatggcagcatgcaagatgaaattcttgggtcagaaaag
cccaaagcccagcaacaggaaatgcaagaaacgcaagaaaaacagctactatcccctggc
cacccggagtctggaatcgtatctgagttagagaaggcgaggtcagaggaaaacaaggtg
gagggcggcccctctgagggtagcaatggaaaagagaagctgcgcctcgagtccccagta
ctgacaggcttcgactaccaagagacatcaggtcttgggactccgtgccagtccagtacc
tcctcgtccctgactggcttcaacaactggtcagctgctatttcccagaccccctccacc
atcatcaacgaggatgtcagcttctttaacccagctgcctctgctaacaacgggcccctc
ctgttccagaatttctcccaccatgtcagcccaggcttcgggggaaacttctctccccag
attggacccatctcccagcaccatcccccacacccccactttcagcatccccacaaccag
caccaacagcaccgaaggtccccggccagcccccaccctcctcccttcccccataggaat
gctgcctttagccagttgccgcatttgtccaataacctgaataagcccccgtcaccttgg
ggtagctaccaaagcccttctccctccccctcctccacctcctggagccccggtgggggc
tatggtggctggggaggctcccaggggcgtgagtaccgtcggggcctcaacggaggcatg
actcccctgaactcaatctccccactgaagaagaccttccccaacaaccacgtgccgtca
cagaagtactcccgcaccagccccggcttcaaccccaagtcctggatggacgagagtgtg
agcaggagcgagaacatcttccccttccaggagcgcaccagatcctttgatggcttcaac
atgcactccctggagaactctctcattgacatcatgagggctgagcaagataccctgaaa
gcaaggaattatgggaggagacgagtccattcttccctgttccccatggaggatggtttc
cctgacgacgagcgcggcgagcagagcctgcctggcctaggctcgccccactgcttcccc
caccagaacggggagcgagtggagcgctactcacgcaaggtcttcgttggcggtctcccc
cctgatatcgatgaagatgagataacggctagtttccgtcgctttggacacctctttgtg
gactggcctcacaaggcagagagcaaatcttactttcccccgaaaggttatgccttcctg
ctgttccaggatgagagctctgtgcaggccctgatcgaggcctgtattgaagaggacggg
aagctctacctgtgtgtgtccagccccaccatcaaagacaagccggtccagatccgcccc
tggaacctgaacgacagtgactttgtgatggacggctcccagcctctggaccccaggaag
accatatttgtgggtggtgtgccacgccctctccgtgcagtggagctagcaatgatcatg
gacaggctgtatggaggggtgtgctacgccggtatcgacacagaccccgagctcaagtac
cccaagggagcagggcgggtcgccttctctaatcagcagagctacattgctgctatcagc
gctcgttttgtccaactgcagcatggagaaatcgataaacgggtggaagtgaagccatac
gtcctggacgaccagttgtgtgatgagtgtcagggaacccggtgtgggggcaagtttgcc
cccttcttctgcgccaacgtcacctgtcttcagtattactgtgaatactgctgggcggcc
attcactcacgcgccggccgggagttccacaagccactggtaaaggaaggaggggaccgg
cctaggcacatctccttccgctggaactga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (28)   
   KEGG ORTHOLOGY (1)   
   RefGene (24)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (5)   
   RefSeq(nuc) (3)   
   GenBank (1)   
   EMBL (1)   
Protein domain (4)   
   Pfam (4)   
All databases (46)   

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