KEGG   Salmo salar (Atlantic salmon): 106571964
Entry
106571964         CDS       T04363                                 
Name
(RefSeq) charged multivesicular body protein 4c-like
  KO
K12194  charged multivesicular body protein 4A/B
Organism
sasa  Salmo salar (Atlantic salmon)
Pathway
sasa03250  Viral life cycle - HIV-1
sasa04144  Endocytosis
sasa04217  Necroptosis
Brite
KEGG Orthology (KO) [BR:sasa00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    106571964
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    106571964
  09143 Cell growth and death
   04217 Necroptosis
    106571964
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:sasa04131]
    106571964
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:sasa04147]
    106571964
Membrane trafficking [BR:sasa04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-III complex
    106571964
Exosome [BR:sasa04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   106571964
  Exosomal proteins of other body fluids (saliva and urine)
   106571964
  Exosomal proteins of colorectal cancer cells
   106571964
SSDB
Motif
Pfam: Snf7 DUF6437 SYF2 MethyltransfD12
Other DBs
NCBI-GeneID: 106571964
NCBI-ProteinID: XP_014001056
UniProt: A0A1S3MDN7
Position
ssa15:62532025..62540870
AA seq 222 aa
MSVFGKLFGGGGKGGKGPSPQDAIQKLRDTEEMLAKKQDFLEKKIDQELMTAKKNGTKNK
RAALQALKRKKRYENQLNQIDGTLSTIEFQREALENANTNTEVLKNMGFAAKAMKAAHEN
MDIDKVDDLMQDITEQQELAQEISDAISKPVGFGEEFDDDELLAELDELEQEELDKNLLE
IGGTEDAHLPNVPSTSLPSRPAKEDEDKDDMDDLQRWAMEAM
NT seq 669 nt   +upstreamnt  +downstreamnt
atgtccgtgtttgggaagctgttcggcggtggggggaaaggagggaaagggccgagtcca
caagatgcgattcagaaactccgagacacagaggagatgttagcgaagaaacaggacttt
ctagagaaaaagattgaccaggaactcatgactgcaaagaaaaacggcacaaaaaacaaa
cgagcggccctgcaggccttgaaaaggaagaagcggtacgagaaccagcttaaccagatc
gatggcacattgtccaccatcgagttccagagggaggcgctggaaaatgccaacaccaac
actgaagtgctcaaaaacatgggctttgccgccaaggcaatgaaggctgcccatgaaaac
atggacatagacaaagtagatgacttgatgcaagacatcactgagcagcaggagctggcg
caggagatctcagatgccatctcaaaacctgtaggctttggagaggagtttgatgacgat
gaactcctggcagagttggatgagctggaacaagaggaattggacaaaaacttgctggag
atcggtgggacagaagatgctcatctacccaatgtgccttctacttcattaccctccaga
cctgccaaggaggatgaagacaaggatgacatggatgacttacaacgctgggcgatggag
gccatgtag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (26)   
   KEGG ORTHOLOGY (1)   
   RefGene (22)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (4)   
   Pfam (4)   
All databases (42)   

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