KEGG   Salmo salar (Atlantic salmon): 106572604
Entry
106572604         CDS       T04363                                 
Name
(RefSeq) tubulin alpha-1C chain
  KO
K07374  tubulin alpha
Organism
sasa  Salmo salar (Atlantic salmon)
Pathway
sasa04145  Phagosome
sasa04210  Apoptosis
sasa04530  Tight junction
sasa04540  Gap junction
sasa04814  Motor proteins
sasa05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:sasa00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    106572604
  09143 Cell growth and death
   04210 Apoptosis
    106572604
  09144 Cellular community - eukaryotes
   04530 Tight junction
    106572604
   04540 Gap junction
    106572604
  09142 Cell motility
   04814 Motor proteins
    106572604
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    106572604
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sasa03019]
    106572604
   03036 Chromosome and associated proteins [BR:sasa03036]
    106572604
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:sasa04812]
    106572604
   04147 Exosome [BR:sasa04147]
    106572604
Messenger RNA biogenesis [BR:sasa03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     106572604
Chromosome and associated proteins [BR:sasa03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     106572604
Cytoskeleton proteins [BR:sasa04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    106572604
Exosome [BR:sasa04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   106572604
  Exosomal proteins of other body fluids (saliva and urine)
   106572604
  Exosomal proteins of colorectal cancer cells
   106572604
SSDB
Motif
Pfam: Tubulin Tubulin_C Tubulin_3
Other DBs
NCBI-GeneID: 106572604
NCBI-ProteinID: XP_014002411
UniProt: A0A1S3MHP9
Position
ssa15:complement(87841789..87846832)
AA seq 449 aa
MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD
RIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVSEITNACFEPAN
QMVKCDPRHGKYMSCCLLYRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKIGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAVAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFAE
AREDMAALEKDYEEVGRDSGEGDEDGEEY
NT seq 1350 nt   +upstreamnt  +downstreamnt
atgcgtgagtgcatctccgtccacgtgggtcaggctggagtccagattggcaatgcctgc
tgggagctctactgcctggagcatgggatccagccggatggacagatgcccagtgacaag
accattggaggaggagacgactccttcaacaccttcttcagtgagactggggctggaaag
catgtccccagggctgtgtttgtggacctggagcccacagttattgatgaggtgcgtact
gggacctatcgtcagttattccatcctgaacagctcatcactggcaaagaggatgctgcc
aacaactacgctcgtggacactacactattggcaaagagatcatcgacctggtgctggac
aggatccgcaaactggctgaccagtgtacaggccttcaaggcttcctggttttccacagc
tttggaggtggcaccggctctggtttcacttccctgctgatggagcgcctgtctgttgac
tatggcaagaagtccaagctggagttctccatctacccagctccccaggtgtccacagct
gtggtggagccctacaactccatcctgaccacccataccaccctagagcactctgactgt
gccttcatggtggataatgaggctatctatgacatctgccgtaggaacctcgacattgag
cgtcctacctacaccaacctcaacaggctcattagccagatcgtttcttccatcactgct
tcccttcgatttgatggtgccctcaatgttgatctgacagagttccagaccaacttggtg
ccctacccccgtatccatttccctctggccacctatgctccagttatctctgcagagaag
gcttaccatgagcagttaactgtctctgaaataaccaatgcctgctttgaaccagccaat
cagatggtgaagtgtgaccctcgccacggcaagtacatgtcatgctgccttctgtaccgt
ggtgacgtggtacccaaagatgtcaatgctgccattgccaccatcaagaccaaacgttcc
attcagtttgttgactggtgtccaactggcttcaagattggcatcaactatcagcctccc
actgtagtccctggtggagacctggccaaagtccagagggctgtgtgcatgctgagcaac
accactgctgtggcagaggcctgggctcggcttgaccacaagtttgacctgatgtacgcc
aaacgtgcctttgtgcactggtatgtgggtgagggcatggaggagggagagtttgctgag
gccagagaggacatggcagccctggagaaagattatgaagaggtgggacgtgacagtggt
gaaggagatgaggacggggaagagtattag

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Pathway (6)   
   KEGG PATHWAY (6)   
Genome (1)   
   KEGG GENOME (1)   
Gene (142)   
   KEGG ORTHOLOGY (1)   
   RefGene (138)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (160)   

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