KEGG   Salmo salar (Atlantic salmon): 106577794
Entry
106577794         CDS       T04363                                 
Name
(RefSeq) apoptotic chromatin condensation inducer in the nucleus-like
  KO
K12875  apoptotic chromatin condensation inducer in the nucleus
Organism
sasa  Salmo salar (Atlantic salmon)
Pathway
sasa03013  Nucleocytoplasmic transport
sasa03015  mRNA surveillance pathway
sasa03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:sasa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    106577794
  09122 Translation
   03013 Nucleocytoplasmic transport
    106577794
   03015 mRNA surveillance pathway
    106577794
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sasa03019]
    106577794
   03041 Spliceosome [BR:sasa03041]
    106577794
Messenger RNA biogenesis [BR:sasa03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     106577794
Spliceosome [BR:sasa03041]
 Complex C
  Other components
   EJC/TREX
    106577794
SSDB
Motif
Pfam: RSB_motif SAP Rhabdo_ncap
Other DBs
NCBI-GeneID: 106577794
NCBI-ProteinID: XP_014011611
UniProt: A0A1S3N950
Position
ssa18:complement(57068505..57095290)
AA seq 1485 aa
MADEDVTLDGKSLQSLRVADLKAALEHRHLPKSGAKNALIKRLKGALMLENVKKTSTSHI
GLQPNSQIGEEMSQNSFIKQYLAQQQELLRQRLEREAREAAEADAGETGPEEEEEDDDDD
DDDDTEQDNDSASYHPDKHRPIPSQPPLTRAEEEEGGGPMMMGQGMMSQGMGKGMMSRRP
HFGPGSVPQESPDAPGSWMQQRLSLHTGPRHEEPTTPSPPRAVASLSVRVLGDPERQGLP
PSMPPRVQAQDNEGTAPADDDRPAHYVLHLSRSARAAASAGGNRVQEDSDDDEDDSSEED
EDEWGPAAGARRGVGGGGRGGRSPPPRPQQPSPSVPVGRERSRRKLQPPQHIPPQQVVHQ
PPMQLRQPTPPPSPPPELSFPLPDTPKQSPPDMDEEPEGAGAGVAVRSPPGGLQRQDSDS
SSRSSSPEPLAQRRPGPLSLLARKMASEGAFGKRGEGASDGQTGPGGESSGPGDGGSSVP
EAGPEVGVVLFPGAAITHIGGSSAAHSGTVPVPDVPAPVSMFGSGAQFHPLSLVSGAAVP
SITLTAEPQGPSGETAQKRTEKEKKQVEEREMKQVEKEKQEESESCLPPWKHGRDVTSVS
SQFGSGGSEVPAVHQVDSPKKSPFDRDEPLSSPPGSTTCLPDLAPKKPRMFSDTSSGSMA
SPPKPGQQGSVVVTTPGEPPLKQEVLISGAQQDTDNTIEVTSPKKASAEKPGWKTGGDIA
KTETESDSQAEKETPKAAGETRRRGPEEAVEVEPMGPVLPPSYPGKGEEEKKRKEDVRKK
EEERCRQRKKASDRRSSPSSGDSSSSDSDSGSSSSRSSGSTSSRDKKKKSVPGKGRGHER
RRLEKGGEKKQPSREKKQSSLSEPSGPGPMEVEERPDPEDSRAPQPTPEGDPENSEGRME
ESTTPKALATRSISLTTGSKTSPEGPGEAESGTAAGRKRRWGSSTAVTTKKPSISITTDS
LKSLIPDIKPSQDAVMDLHPDDSQLSGDEDTPTTREDQGLDKDLKIRRTVTQVVPGESHE
NGQGEREEEEVENKQERERTHKEKRKNSYSEDTMVSQSSTTHDAKKVTPSDTLVRRSISQ
QKSGVSVTIDDPVRTDKLPSPPRGKVSNIVHVCNLVRPFTLGQLKELLNRTGSVVEEGFW
IDKIKSHCYVTYSSTEEAVATRAALHGVKWPQSNPKVLTVDFCEQNELDFHRGLLTVDPR
EEHRPQPAVGPGGPKVRPGGLPPLMPERDGRADRGAVGGVRDQWAEREREMERRERTRAE
REWDRDKVRDFGGKPGEERERGRRSRSLERERRRKEREGKEKKTDKKDEPPVKLLDDLFN
KTKAAPCIYWLPLTEEQANQRGKEREERQKERERRRKEQQEEEDKKREEERKERMKSREE
GGAAVSTGGGSVRGSEGDRDREGERGRDREGERGRDREGERGRDREGERGRDREGERGRD
REGERGRDGDKRKDIGAFKPKGPDAKPLSGFRRSRSRSNLRDRRR
NT seq 4458 nt   +upstreamnt  +downstreamnt
atggccgatgaagatgttacgctggatggtaaatcgcttcaatcgctccgtgtggcggat
ttaaaagccgctttggagcaccgacacctccctaaaagcggggcgaaaaatgcgctcatt
aagcgactgaaaggggctctgatgttggaaaatgttaagaagacttccacttcccacatt
gggctccagcccaactcccagattggggaggagatgagccagaacagcttcataaagcag
tacctggctcagcagcaggagctcctccgccagaggctggagagagaggcccgggaggcg
gcagaggccgatgcaggggaaacaggcccggaggaggaggaggaggacgacgatgacgac
gacgacgacgacacagagcaggacaatgacagtgcttcctaccaccctgacaagcatcgc
cccataccctcccagcccccactgacccgggccgaggaagaggaaggaggtggaccaatg
atgatggggcaaggaatgatgtctcagggtatgggcaaagggatgatgtctcgcagacca
cactttggcccaggctccgtgccccaggaatcccctgacgcccctggatcctggatgcag
cagcgtctctcactccacactggcccccgccatgaggagcccaccaccccctcaccgccc
cgcgctgtggcctcgctgtctgtgcgtgtcctgggggaccctgagcgccagggcctgcca
ccctccatgcccccccgcgtccaggcccaggataatgaaggcaccgccccggcggatgac
gaccgacccgcccactatgtgctccacctcagccgctccgctcgggcagcagccagcgcc
gggggtaaccgtgtccaggaagacagcgatgatgatgaagatgacagcagtgaggaggac
gaagatgagtggggacctgcggcaggggcaaggagaggggtcggaggcggaggaagagga
ggacgttcccctccccctcggccccagcagccttcccccagcgtcccagtgggccgagag
agatccagacgcaagctccagcctccgcaacacatcccccctcagcaggtagtacaccag
cccccgatgcagctccgccagcccaccccgcccccctctccacccccagagctctccttt
cccctccccgacacccccaagcagagcccgcccgacatggatgaggagccagaaggagca
ggggctggggtagccgtccgctcccctccaggtggcctccagaggcaggactccgactcc
agctcccgctccagcagcccagagcccctggcccagcggcggcccggacccctctccctg
ctcgcccgcaagatggcttccgagggagcgttcgggaagagaggtgagggtgcctcagac
ggccagacaggtcctggtggggagtcgtccggaccaggagatggcggtagcagcgtccca
gaagcaggaccggaggttggggtagtcctgttccctggggctgctatcacccacatcgga
ggcagcagcgcagcgcactccggaactgtccctgtacctgatgtccctgcaccagtgtct
atgtttggatcaggagcccagttccatcctctctctctggtgtctggagcagctgtcccc
agcatcaccctcaccgcggagccccagggtccatctggagagacggcacagaagaggact
gagaaagaaaagaagcaggtggaggaaagggagatgaagcaagtggagaaggagaaacag
gaagagagtgagagttgcctgccgccatggaagcacggacgtgatgtgacgtctgtgtcc
tcgcagtttgggtctggggggtcagaggtgcctgcggtgcaccaggtggacagcccgaag
aagtcacccttcgacagggacgaacccctctcctcccctcccggctcaaccacctgcctg
cctgatctcgcccccaagaagccccgcatgttctccgacacctcatccggctccatggca
tcccctcccaaacctgggcagcaggggtctgtggtggtgaccaccccaggggaacccccc
ctcaaacaggaagtcctcatctcaggagcccagcaggacacagacaacaccatagaggtc
acttcaccgaaaaaggcgtccgcggaaaagcctggatggaaaactggaggagacattgca
aaaacagagacggagagtgacagccaggcagaaaaggagacaccgaaagccgccggcgag
accaggagaagaggacctgaagaggctgttgaggttgagcccatggggcctgttctgccc
ccctcttacccaggtaagggagaagaagagaagaagcggaaggaagatgtgaggaagaag
gaagaagagcggtgcaggcagaggaagaaggcgagcgacaggaggtcatccccctccagc
ggcgactcttcatcctccgactcggattctggatcctcttcatcacgttcctctggctcc
acctcctcccgggacaaaaaaaagaaatctgtcccaggaaaaggaagagggcatgaaagg
agaagactggaaaaaggaggagagaagaaacaaccttccagggagaagaagcagtcttcc
ctgtcggagccgtccggccctggccctatggaggtggaggagaggccagacccagaggac
tccagggccccccagcccacccccgaaggggacccagagaacagtgagggccgcatggag
gagagcaccactcctaaagctttggccacacgcagcatctctttaaccacaggcagtaag
acgtctccagagggaccaggagaggcagagtctgggaccgccgctgggaggaagaggagg
tggggatccagcacggccgtcaccaccaagaaaccgtccatcagcatcaccaccgactct
ctgaagtctctgatcccagacatcaagcccagtcaggatgctgtaatggatctccaccca
gacgacagccagctgtctggggacgaggacacacccaccaccagggaggaccagggcctg
gacaaagacctgaagatcagacgcaccgtcacacaggtggtcccaggtgaaagccatgag
aatggccagggagaacgagaggaggaagaggtggagaataaacaggagcgtgagaggaca
cacaaagagaagagaaagaacagctactcagaagataccatggtgtctcagtcgtccaca
acacacgatgccaagaaagtcactcccagtgatactctggtgcgtcgctccatcagtcag
cagaagtctggtgtgtctgttaccatcgacgatccggttcgcacagacaaactgccctct
ccgcccagaggcaaagtctccaacatcgtccacgtctgtaacctggtgcgacctttcacc
ctgggccagctgaaggagctgctgaacaggacaggctcggtggtggaggagggcttctgg
atcgacaagatcaaatctcactgctacgtcacttactccagcacagaggaggctgtggcc
acacgagctgctcttcacggggtgaagtggccccagagcaaccctaaggtcctcactgtg
gacttctgtgagcagaacgagctggacttccacagaggtctgctgaccgtggaccccaga
gaggagcaccggccccagcctgccgtgggtcctggaggtcccaaagtccgaccggggggg
ctgccccctctgatgcctgaacgggacgggcgcgcggaccgcggggctgtcggaggggtg
cgggaccagtgggcggagagagagagggagatggaacgccgggagaggaccagggcggaa
cgcgagtgggaccgggacaaggtgcgagacttcggaggcaaaccaggagaggagagggag
agagggaggagatctcgctccctggaaagagagaggaggcgaaaggagagggaagggaag
gagaagaagaccgacaaaaaggatgagcctcctgtcaaactactagacgacctcttcaat
aagaccaaagcagctccctgtatatactggcttcccctcactgaggaacaggcaaaccag
agggggaaggaacgggaagagcgacagaaagaacgcgagaggaggcggaaagaacagcag
gaggaggaggacaagaagcgagaggaggagaggaaggagagaatgaaaagtagagaggag
ggaggagctgcggttagcactggaggtgggagtgtccggggatctgagggagacagggac
agagagggggagcgagggagggacagagagggggagcgagggagggacagagagggggag
cgagggagggacagagagggggagcgagggagggacagagagggggagcgagggagggac
agagagggggagcgagggagggacggggacaagaggaaggacattggtgctttcaaaccc
aaaggtcccgatgctaaacccttgtcggggttccgacgctcccgtagccgtagcaacctc
cgagacagacgccgctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (100)   
   KEGG ORTHOLOGY (1)   
   RefGene (96)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (113)   

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