KEGG   Salmo salar (Atlantic salmon): 106578928
Entry
106578928         CDS       T04363                                 
Name
(RefSeq) protein transport protein Sec24C-like
  KO
K14007  protein transport protein SEC24
Organism
sasa  Salmo salar (Atlantic salmon)
Pathway
sasa04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:sasa00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    106578928
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:sasa04131]
    106578928
Membrane trafficking [BR:sasa04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    106578928
SSDB
Motif
Pfam: Sec23_trunk Sec23_helical Sec23_BS zf-Sec23_Sec24 Gelsolin
Other DBs
NCBI-GeneID: 106578928
NCBI-ProteinID: XP_014013672
UniProt: A0A1S3NE38
Position
ssa19:44284535..44310976
AA seq 1221 aa
MNVNQQPPMASPYGQPQPGYGQPSYAPLGGGYPGPYGPYSGPATAYQPGAPQGYSTYASF
PSKAVAANPVSDLSSPLDLGSARGPPPVSTNHAYSQYAQGDIQNGPPPMDHSMAQPAHRP
PVSQPYSHGAMNLSGPHPSYPQQYRAQPSMQQMTNQMSGMQVGSGPLTSAGPGYAPPPSS
KPPISAAYSAAAPPSYTQAPPPVSGAPSQPPPPSEPAAPQPYYDGPPPSQQQPFPSSAPP
PSQPFPSSSPYSGPPPSSQPWAPAVSRQQSFPPGPPTPAQQTFPNSAPPPVSQASYSGPP
PSSQPGPFPPTFAPPAQYPAPQPPSQPGPPPFHSGPPPQCPMPPPSMSQQQANHLPPGPM
QQPPQPGMQGGYPPQQNGAFGQPRGPQPGYAGPQYPGQQNYGAGPAPTPAPTQKRLDPDS
IPSPQASELPAVQKFRHRIDPDAIPSPIQVIEDDRANKSSEPFTTGVKGQTPPLVTTNFQ
VKDQGNASPRFIRCTAYNIPCTADMAKQSQVPLAAVIKPLAMLPPDETRPYIVDHGEAGP
IRCNRCKAYMCPYMQFIEGGRRFQCGFCSCVTDVPPHYFQHLDHTGKRVDCCDRPELSLG
SYEFVATVDYCKNNKLPQPPSFIFFIDVSYNAVKSGMVNIVCQELKTLLDYLPRENPEAD
SVVRVGFVTYNKVLHFYNVKSSLAQPQMMVVSDVSDMFLPLLDGFLVDVNDSRMVIESLL
DQIPEMFADTRETETVFGPVIQAGLEALKAADCAGKLFLFHSSLPIAEAPGKLKNREDKK
LVGTDKEKSLFQPQSGFYSNLSKECVAQGCCVDLFLFPNQYVDVPTLGVVPVSTGGSVYK
YTYFQAEMDRERFLNDLRRDVQKPMGFDAVMRVRTSTGIRATDFFGSFFMSNTTDVELAG
LDCDKTVTVEFRHDDKLSEDTGALMQCAVLYTSCSGQRRLRVHNMAVNCCSQLADLYRNC
ETDTIINFFSKYAYRSLLNTPTKTVRDTLVNQCAQILACYRKNCASPSSAGQVSHSHSPP
LGQLILPECMKLLPVYLNCVLKSDVLQPGADVSVDDRAYLRQLLSCMDVSESHVFFYPRL
LPLVKLDGGSLPMAVRNSEERLSKGGVYLLETGLYLFLWVGANAQQELLSNIFGTPTFSQ
IDPNMTSLPELDNPFSQRLREIIDSFRSQRSRYMKLMVVKQEDKAELIFKHFLCEDKSAS
GGASYVDFLCHMHKEIRQLLS
NT seq 3666 nt   +upstreamnt  +downstreamnt
atgaatgtgaaccagcagcctcccatggcatctccgtacggccagccccagcctggctac
ggccagcctagctacgctcccttggggggtggctaccccggcccctacggaccctacagc
ggccccgctacagcctaccagcctggggctccacaaggttattctacctatgccagcttt
ccctctaaggctgtggcagctaacccagtctctgacctgtcctctcctcttgacttggga
tctgccaggggcccccctccagtctccaccaaccacgcctactcccagtatgcccaggga
gacattcagaatggacccccacctatggatcactctatggctcagccagctcacaggcct
ccagtgtctcagccgtatagccacggtgctatgaacttgtcggggccacacccttcatac
ccccagcagtaccgggcgcagccctccatgcaacagatgaccaatcagatgtcagggatg
caggtcgggtcaggccccctcacctctgctgggccgggatatgctccacctcccagctcc
aagcctccaatcagtgctgcctactccgctgcagcccctccctcctatacacaagctcct
cccccagtgtctggtgccccctcccagcctccccctcccagtgagcctgcagccccccaa
ccttactatgatggcccccctccctctcaacaacaacccttcccctcctccgccccccct
ccctctcaacccttcccctcctcctctccatactcgggccctcccccttccagccaacct
tgggcccctgcagtctctcgacaacagtccttcccacctggcccccctacccctgctcag
caaaccttcccaaactctgctcctcctccagtctcccaggcctcgtactctggcccccct
ccctcctcccaacctggccctttcccacctacctttgcaccccctgcccagtaccctgcc
ccccagcccccgtcccaacccgggccccctcccttccactctggcccccctccccaatgc
cccatgccacccccctccatgtcccagcagcaggccaaccaccttccccctggccccatg
cagcagcctcctcagcctggcatgcagggaggatacccaccccagcagaatggtgcattt
gggcagcccagaggcccccagcccggctatgcaggcccgcagtatcctgggcaacagaac
tacggagcaggcccagctcccacccctgcacccacacagaagagactggaccctgactcc
atccccagcccgcaagcgtctgagctgccggctgtgcagaaattcagacatagaatagac
ccagatgctatccccagtccaatccaggtgattgaggacgaccgggccaacaagagcagt
gagccgttcaccacgggggtcaaaggtcagactccgccccttgtcaccaccaacttccag
gtgaaagaccagggcaacgccagcccgcggttcatccgctgtacagcctacaacataccc
tgcacggccgacatggccaaacagtcccaggtccccctggctgccgtaatcaaacctcta
gccatgttgccccctgacgagacccgtccgtacatcgtggaccatggggaggccggtcct
atccgctgtaaccgctgtaaggcctacatgtgtccctacatgcagttcatcgagggcgga
cgccgcttccagtgtggcttctgcagctgcgtcacagacgtgcctccccactactttcag
catctggaccacacagggaagagggtggactgctgtgaccggccagagctctcgctgggc
agctacgagtttgtggcaaccgtcgactactgtaagaacaataagctcccccagcccccg
tcgttcatctttttcatcgatgtgtcttacaacgccgtgaagagcggcatggttaacatc
gtctgtcaggagctcaagactctactggactacctgcccagggagaatccagaggcagac
tcagtggtgcgcgtgggttttgtgacctataacaaggtgttgcacttctacaacgtcaag
tccagcctggcccagccccagatgatggtcgtcagtgacgtcagtgacatgttcctgcct
ctgctcgacggcttcctggtcgacgtcaacgacagccggatggtcatcgagagtttgcta
gaccagattccggagatgtttgcagacaccagggagactgagacggtgtttggaccagtc
atccaggcaggactggaggcactgaaggctgcagactgtgccgggaagctgtttttgttc
cactccagtctgccaatcgctgaggctcctgggaagctgaagaacagagaggacaagaaa
ctggtgggaacagacaaggagaagtctctgttccagccccagtctggtttctatagtaac
ctgtctaaggagtgtgtagcacagggctgctgtgtggacctcttcctgttccccaaccag
tacgtcgacgtgccaacgcttggcgtggtgcccgtctccactggcggctcagtctacaaa
tacacctacttccaggctgagatggaccgcgaacggttcctgaatgatctgcggcgagac
gttcagaagccgatgggctttgacgcagtcatgagggtccgaacgagcacaggtatcaga
gcgacagatttcttcggctcgttcttcatgagtaacacgacagacgtggagctggcagga
ctggactgtgacaagactgttaccgtggaattccgccatgacgacaagctcagcgaggac
acgggggcactcatgcagtgtgcggtgttgtacaccagctgtagtggtcagcggcgtctg
agggtccacaacatggcggtcaactgctgctcccagctcgccgacctctaccggaactgt
gagacagacacaatcatcaacttcttctccaagtatgcgtaccgcagcctattgaacacc
cccaccaagacggtgagagacaccttggtgaaccagtgtgcccagattctggcctgctac
cgcaagaactgtgccagcccctcgtctgccggacaggtcagtcactcacacagcccccct
cttggacagctgatcctaccagagtgtatgaagctgctgccggtctacttgaactgtgtg
ttgaagagcgacgtgctgcaaccgggagctgacgtctcagtagacgacagagcctacctg
agacagctgctcagctgtatggacgtatcagagagccacgtcttcttctatccccgccta
cttcccctggtgaagttggatggagggtcgttgccaatggcagtacgtaactcggaggag
cgcctgtcaaagggtggagtctacctcctggagacggggctctacctcttcctgtgggtg
ggagccaatgcccagcaggagctgctcagcaacatcttcggcacgcccaccttcagccag
atagaccccaacatgacgagtctgccagagctggacaacccgttctcccagagactcaga
gagatcatcgactccttcagatcacaacgatcgcgatacatgaagttgatggtggtgaag
caggaggacaaggcggagctaatctttaaacacttcctgtgtgaggacaaaagcgccagc
ggaggagcttcctacgttgacttcctgtgtcacatgcacaaggaaatccgccagctgctc
agctag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (156)   
   KEGG ORTHOLOGY (1)   
   RefGene (152)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (6)   
   UniProt (1)   
   RefSeq(pep) (5)   
DNA sequence (5)   
   RefSeq(nuc) (5)   
Protein domain (5)   
   Pfam (5)   
All databases (176)   

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