KEGG   Salmo salar (Atlantic salmon): 106585055
Entry
106585055         CDS       T04363                                 
Symbol
polb
Name
(RefSeq) DNA polymerase beta
  KO
K02330  DNA polymerase beta [EC:2.7.7.7 4.2.99.-]
Organism
sasa  Salmo salar (Atlantic salmon)
Pathway
sasa03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:sasa00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    106585055 (polb)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sasa03400]
    106585055 (polb)
Enzymes [BR:sasa01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     106585055 (polb)
DNA repair and recombination proteins [BR:sasa03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     106585055 (polb)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    X-family DNA polymerases
     106585055 (polb)
SSDB
Motif
Pfam: DNA_pol_B_palm DNA_pol_B_thumb HHH_8 DNA_pol_lambd_f HHH_5 Cactin_mid HHH_2 NTP_transf_2 DUF4806 Cdd1
Other DBs
NCBI-GeneID: 106585055
NCBI-ProteinID: XP_014026285
UniProt: A0A1S3PF96
Position
ssa24:13939284..13946133
AA seq 336 aa
MSKRKAPQESPNEGITDFLTELANYERNVNRAIHKYNAYRKAASVISKYPQKIKNGEEAK
KLDGVGKEIAKKIDEFLQTGTLKKLEKIRNDDTSSSINFLTRVTGIGPAAARKFFDEGVK
TLEDLKKIEHKLNHHQQIGLKYFEEFEKRIPRSEMTKMETLILQELELVDTEYIGTICGS
YRRGAESSGDIDILLTHPNYTSVDEKQPKLLHAVVEHFESIGFITDTLSKGDTKYMGVCQ
LQQNDEGEEEYLHRRIDIRLIPKDQYYCGVLYFTGSDIFNKNMRTHALEKGFTLNEYTIR
PVGVTGMAGEPLMVDSEKDIFDYIQWKYREPKERSE
NT seq 1011 nt   +upstreamnt  +downstreamnt
atgagtaaaaggaaagcgccacaggaatccccaaacgagggaataacagactttcttacc
gaattggccaactatgagaggaatgtcaacagagctatacacaagtacaatgcctacagg
aaagcagcttcagtgatctccaagtacccccagaagatcaaaaatggggaagaggccaag
aaactggatggcgttggaaaagagatcgctaagaagatagatgagtttttacaaacagga
acacttaagaagttagaaaagattcgtaatgatgacaccagctcctccatcaatttcctt
accagagtcactggtattggtcctgctgctgccagaaagttctttgatgagggagtgaag
actctggaagatctgaagaaaatcgaacacaagctcaatcatcatcagcagattggactc
aagtactttgaggagtttgagaagaggattccacgatctgagatgacgaagatggagact
ctcattctgcaggagctggagttggtggatactgagtacattgggacaatctgtggaagc
tacaggagaggtgctgaatccagtggggatattgatatcttactgacccacccaaactat
acctctgtggatgagaaacagcccaaacttctccatgccgtggtggagcattttgaatcc
attgggttcattacagacacactgtccaaaggagacaccaaatacatgggagtctgccag
ctgcagcagaatgatgaaggtgaggaggaatatcttcacagacgcattgatatcaggtta
attcctaaggaccagtattactgtggtgtgctgtatttcactggcagtgacatcttcaat
aagaacatgagaactcacgctctggagaaaggcttcaccctcaatgagtacaccatccgt
ccagtgggggtcactggtatggctggggaacctctgatggtggacagtgagaaggatatc
tttgactacatccaatggaaatacagagagcccaaagaacgcagcgaatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (22)   
   KEGG ORTHOLOGY (1)   
   RefGene (18)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (10)   
   Pfam (10)   
All databases (41)   

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