KEGG   Salmo salar (Atlantic salmon): 106585142
Entry
106585142         CDS       T04363                                 
Name
(RefSeq) TNF receptor-associated factor 2-like
  KO
K03173  TNF receptor-associated factor 2 [EC:2.3.2.27]
Organism
sasa  Salmo salar (Atlantic salmon)
Pathway
sasa04010  MAPK signaling pathway
sasa04137  Mitophagy - animal
sasa04141  Protein processing in endoplasmic reticulum
sasa04210  Apoptosis
sasa04217  Necroptosis
sasa04621  NOD-like receptor signaling pathway
sasa04622  RIG-I-like receptor signaling pathway
sasa04920  Adipocytokine signaling pathway
sasa05132  Salmonella infection
sasa05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:sasa00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    106585142
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    106585142
 09140 Cellular Processes
  09141 Transport and catabolism
   04137 Mitophagy - animal
    106585142
  09143 Cell growth and death
   04210 Apoptosis
    106585142
   04217 Necroptosis
    106585142
 09150 Organismal Systems
  09151 Immune system
   04621 NOD-like receptor signaling pathway
    106585142
   04622 RIG-I-like receptor signaling pathway
    106585142
  09152 Endocrine system
   04920 Adipocytokine signaling pathway
    106585142
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    106585142
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    106585142
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sasa03019]
    106585142
   04121 Ubiquitin system [BR:sasa04121]
    106585142
Enzymes [BR:sasa01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     106585142
Messenger RNA biogenesis [BR:sasa03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Stress granule specific factors
     106585142
Ubiquitin system [BR:sasa04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRAF proteins
    106585142
SSDB
Motif
Pfam: TRAF-mep_MATH TRAF_BIRC3_bd zf-TRAF TRAF2_zf zf-C3HC4 TRAF3_RING zf-C3HC4_2 zf-C3HC4_4 zf-RING_6 zf-RING_4 Sina_ZnF zf-RING_5 zf-RING_UBOX ATG16 zf-ACC
Other DBs
NCBI-GeneID: 106585142
NCBI-ProteinID: XP_014026489
UniProt: A0A1S3PGD3
Position
ssa24:complement(8594251..8605855)
AA seq 587 aa
MAAQEPSPPSSLEGNKPGFPKKILANNLEEKHMCNSCLEILRRPLQAQCGHRFCSFCFNK
IVSSGPHKCSACIKEDLFEDPTSILKEGGAFPDNAARREVEALSAVCPNEGCTWTGNIKE
YEVNHEGKCDFMIILCPSCKELMRTNELERHNERECPERTLNCKYCKEPFHFKNIKAHDE
ICPKYPMICEGCAKKKIPREKYVDHIKFCSKFRAPCRFHVVGCDMSVEKEKTHDHERACS
YEHLNLLLHFIMGIKVSLESLQPQSLELAGHKIHELHRALRELELKLGQLTLGGGAPVQG
ACAPTLPTLALPALATSFTPLPSAVGAALELQLHSEKTKVAELSRRCQELELKVGTFENI
VCVLNREMERSSTTIEAYNRQHRLDQDKVEILNNKVRQLERTVGLRDLSIVEMEGNIREM
SAATFDGIFVWKISDFTKKRQDAVAGRAPAMFSPAFFTSKYGYKMCLRIYLNGDGTGRAS
HLSLFFVVMRGHSDALLKWPFNQKVYSWYLSCMINVTLMLLDQNNREHIIDAFRPDISSS
SFQRPVSDMNIASGCPLFCPLPKLDTKNSYIRDDTIFIKAIVDLTGL
NT seq 1764 nt   +upstreamnt  +downstreamnt
atggctgcacaagagccatcaccaccatcttcactggaaggcaacaaaccagggttccct
aagaaaattttggcgaacaacctcgaagaaaaacacatgtgtaattcttgtttggaaata
ttgagaaggcctctacaagcccaatgtggccatcgtttttgttcattctgtttcaacaaa
attgttagttctggaccacataaatgcagtgcttgcatcaaagaggacttgtttgaggac
cccacatctattcttaaagaaggcggtgcttttcctgacaatgcagcgcggagagaagtg
gaagcattgtccgctgtttgtccaaatgaaggatgcacttggacgggcaatatcaaggaa
tatgaggtgaaccacgagggaaagtgtgacttcatgatcattctctgtccctcctgtaaa
gaactcatgagaaccaatgagctggagcgccacaacgaacgagaatgtcctgagaggact
ctaaactgcaaatactgcaaagaacctttccatttcaagaacatcaaggctcacgatgag
atctgtccaaagtaccctatgatttgtgaaggctgcgcaaagaaaaagattcccagagaa
aagtatgtggaccacatcaagttctgcagtaaattcagagcaccttgcagatttcacgtt
gttggctgtgatatgtctgtggagaaggagaagacccatgaccatgagcgtgcatgttcc
tacgaacacttaaatctactcttgcatttcatcatgggcatcaaggtgagcctggagagc
ttgcagccccagagcctggagctcgcaggtcacaagatccacgagctgcaccgggccttg
agagagctggagctgaagctgggacagctgactctgggtgggggagcccccgtgcaggga
gcctgtgcccctaccctccctaccctggccctccccgccctggccacctccttcaccccc
ctgcccagcgcggtgggcgccgccctggagctgcagctccacagtgagaagaccaaggtg
gcagagctgagccggcgttgccaggaactggagctgaaagtgggcaccttcgagaacatt
gtctgcgtcctcaaccgagagatggagcgctcctccaccaccatcgaggcctacaaccgc
cagcatcgcctggaccaggacaaggtggagatcctcaataacaaggtgcgtcagctggag
agaactgtgggcctgagagacctgtccattgtggagatggaggggaatattcgggaaatg
tctgcagctacgtttgatggtatctttgtctggaaaatctcagatttcacaaagaaaaga
caggacgctgttgctggcagagccccagctatgttctccccagcatttttcaccagcaaa
tatggctacaagatgtgcctacggatttatctgaatggggacgggacgggacgggccagt
cacttgtctctgttcttcgtggtgatgaggggacacagtgacgccctcctcaagtggccc
ttcaaccagaaggtctattcttggtatttgtcttgcatgataaatgtgaccctgatgctg
ctggatcagaataaccgagagcacatcatcgatgccttccgtcccgacatctcttcctcc
tccttccagaggcccgtcagtgacatgaacatcgccagcggctgcccactcttctgccct
cttcccaaactggacaccaaaaactcctacatacgagatgatactatattcatcaaggct
atagttgacctcactggcctctag

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (10)   
   KEGG PATHWAY (10)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (18)   
   KEGG ORTHOLOGY (1)   
   RefGene (14)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (5)   
   RefSeq(nuc) (3)   
   GenBank (1)   
   EMBL (1)   
Protein domain (15)   
   Pfam (15)   
All databases (58)   

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