KEGG   Salmo salar (Atlantic salmon): 106586854
Entry
106586854         CDS       T04363                                 
Symbol
rrp1b
Name
(RefSeq) ribosomal RNA processing 1B
  KO
K14849  ribosomal RNA-processing protein 1
Organism
sasa  Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:sasa00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:sasa01009]
    106586854 (rrp1b)
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:sasa03009]
    106586854 (rrp1b)
Protein phosphatases and associated proteins [BR:sasa01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     106586854 (rrp1b)
Ribosome biogenesis [BR:sasa03009]
 Eukaryotic type
  Pre-60S particles
   Other pre-60S particles
    106586854 (rrp1b)
SSDB
Motif
Pfam: Nop52
Other DBs
NCBI-GeneID: 106586854
NCBI-ProteinID: XP_014030049
UniProt: A0A1S3PS46
Position
ssa25:44601790..44607358
AA seq 935 aa
MAPVQQEPEIQFAQRLASNEKPMRTKAIRKLRKYISVRSQKIQGGFEGDELLKLWKGLFY
CLWMQDKPLLQEELSNQISGLMHSFQNIQSQFMFLETFLQTIKREWTGIDRLRMDKFFQL
VRFVFRNTFEMMKRKEWETSVVTRFLELLTAQVLNSSSGAPCGLQFHILDIYMTELAAVG
SAELTAAQNLTFIDPFCKTASKTKDRILLKAICSSIFSTIVDQAPFAIEDLLKEVKATGE
GAEESDSGQASEEEEEVEKEPPKGKKTAKEPPKKTTGGKTNGTVSTEEDDDDDEDGLEDE
EDDEMLHLESDSESEMPDDAGIGPVLQFDYSSLADRLFGLARRSNTPSHNRQRLYKVVKT
LRDLGEGVFPQDEYPEEVSTDEDDDEMFGSRKRMKRGRGLGEEEEESSPAKKWKGKKKDS
KARTSDQTAATDDSKPAETPGDSNNKKKKRKRRKKTGEVKTEEQNGVVAKSEVKAEEDTT
PASAPQTTDSKEAETEPSIPAKGTDTRAAILKEKAKVTAMETGVQSETPRDVVVGNLSSV
TVMEVDQKKQSETPKPDATSSKKKNIKKSKTPAPKEEEVAEPAKTAPETATTTLSRRKNT
KQKPEEQTTVEEVEMTLETVDETTATPPKKRRRRRKKVTRTAEEAETDTTQVDLEPESTP
AKEPPADLRIAATPLKKKKLKVAKAGEESTEAETPPKAEANLTLIDTEVQTLEAATPTPL
KKKKKKRSSGRVAQEPETTTVEESVSEEQPTDADLDTPLKKGKKRKVPVVIEVEAEVNGV
AGGKKANLSNDSKELSTPMSAKKTKKMTPKKAGAESDFITFQNHATIPTPLFFKTTKGSP
STPLSGKKQKKCQTPKSESKKVTFGLNKNKTAEFRKTDRSLLVSPEGSSRVPFDPQQKPL
FGVLKSPEAFLTKSTKKTKSTLKTTPKRPTAADFF
NT seq 2808 nt   +upstreamnt  +downstreamnt
atggcgccggtacaacaagaaccagagatccagttcgctcaaagattggcatctaatgag
aagcccatgcgaacaaaagccatcaggaagctaagaaaatatattagtgttaggtcacag
aaaatccaaggtgggtttgaaggcgacgagttactcaaactatggaaaggactcttttat
tgcctgtggatgcaggacaagccacttcttcaggaggagctgtcgaatcagatctctggc
ctgatgcacagcttccagaacatccagagccagttcatgtttctggagaccttcctgcag
accatcaaaagagaatggactggcattgacaggcttcgcatggataagttcttccagctg
gttcgtttcgtgttcaggaacacttttgagatgatgaagaggaaagaatgggagaccagt
gtggtgaccaggtttctggagctcctgactgcccaggtcctcaacagctccagcggagct
ccctgtggattacagttccacatactggacatctatatgaccgagctggctgcagtcggc
tcagctgagctcacagcggctcagaacctgacattcattgaccctttctgcaaaacagca
tctaaaacgaaagatcggatcctgctcaaggctatctgcagcagcattttcagcaccatc
gtggaccaggctcccttcgccatcgaagacctgttgaaggaagtgaaggctacaggtgaa
ggggctgaggagtccgactcgggacaggcttctgaagaggaggaggaggtagagaaggag
ccccccaagggcaaaaaaactgcaaaggaaccccccaagaaaaccactggtgggaagacc
aacggcactgtatcaactgaggaagatgatgatgatgatgaagatggtctggaggatgaa
gaagatgacgaaatgcttcatctggagagtgactctgagtctgagatgccagatgacgcg
ggaataggacctgttctccagtttgactactctagcctggcagacaggctgtttgggcta
gccagacgcagcaacacccctagccacaacagacagagactgtacaaagtcgtcaagact
ctccgggatctcggtgaaggagtctttccacaggatgagtacccagaggaggtatcgaca
gatgaggatgatgatgaaatgtttggcagcagaaagaggatgaaacggggacgaggctta
ggggaggaggaggaagagagctcaccagccaagaaatggaaaggcaagaaaaaagactcc
aaagcaagaacttctgaccagactgccgcaacagatgacagtaaaccagcggagactccc
ggagactccaataacaagaaaaagaagaggaagaggaggaagaagactggagaggtgaag
actgaagagcagaacggggtggtggcgaagtcagaggtgaaggctgaggaggacacaact
cctgcttctgcaccgcagacgacagactctaaagaagcagagacggagccctctatccca
gccaagggcactgatacgagagcggctatcctgaaggagaaggcaaaggtgacagccatg
gagacaggggtccaatcagaaactccacgggatgtagtggtaggtaacctatcatctgtc
acagtcatggaggtagaccagaagaaacaatcagagactccgaaaccagacgccacgtct
tccaagaagaaaaatatcaagaagtccaaaacgcctgcaccgaaggaggaagaggtagca
gaaccagccaagactgcccctgagactgctactaccaccctgagcaggaggaaaaacacc
aagcagaagcctgaggagcagacaaccgtagaggaagttgaaatgacgttagaaacagta
gacgagaccacagccaccccaccgaaaaagaggaggaggaggaggaagaaggttacacgg
accgctgaggaagctgagacagacacaacacaggtggaccttgaaccagagtctacacca
gccaaggagcctccagctgacctccgcatcgccgccactcccctgaaaaagaagaaacta
aaggtggcaaaggctggagaggagagcactgaggctgaaaccccaccgaaagcagaggca
aacctcacactgatcgacactgaggtacagacgctggaggccgccacacctaccccactc
aagaagaagaagaagaagagaagctctggacgggtagcgcaggagccagagaccacaaca
gtggaggagagcgtttcagaggagcagcctacagatgctgacctggacacgcccctgaag
aaagggaagaagaggaaggtcccggtagtgatagaggtcgaggctgaggtcaacggggtg
gctggaggcaagaaagccaatctgagcaacgacagcaaagagctgtccacgccaatgagc
gccaagaaaacaaaaaaaatgacgcccaagaaggcaggggcggagtcggacttcatcacg
ttccagaaccatgccaccatccctactccccttttcttcaagaccaccaagggaagcccc
agcacaccactatccggcaagaagcagaagaagtgtcagactccaaagtccgaatccaag
aaggttaccttcggactcaataaaaacaaaactgcagagttcaggaagactgaccgcagc
ctgctggtgagtccagaggggtcatcccgagtgccctttgacccccagcagaagcccctg
tttggggtcctgaaatctccagaggcctttcttaccaaaagcactaagaagaccaagagc
accctgaaaaccacccccaaacgccccactgcggctgacttcttctag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (31)   
   KEGG ORTHOLOGY (1)   
   RefGene (27)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (5)   
   UniProt (1)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (1)   
   Pfam (1)   
All databases (45)   

Download RDF
DBGET integrated database retrieval system