KEGG   Salmo salar (Atlantic salmon): 106588173
Entry
106588173         CDS       T04363                                 
Name
(RefSeq) tripartite motif-containing protein 46-like
  KO
K12022  tripartite motif-containing protein 46
Organism
sasa  Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:sasa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:sasa04121]
    106588173
Ubiquitin system [BR:sasa04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    106588173
SSDB
Motif
Pfam: zf-B_box COS zf-C3HC4 zf-C3HC4_2 zf-C3HC4_4 zf-RING_UBOX SPRY zf-C3HC4_3 zf-RING_5 fn3 IBR
Other DBs
NCBI-GeneID: 106588173
NCBI-ProteinID: XP_014032370
UniProt: A0A1S3PXD4
Position
ssa27:complement(1068117..1090176)
AA seq 820 aa
MSHLLVVGQKSPPFQFLVSPLREHRSDYRGRNIPIMAPRFQLKSNVKSMECELHCPVCKE
IVKQPVVLPCQHSVCLMCASEVLVQNGYPAPELPPEPNSPASTPNTRSPRQARRPMSSKA
DHRPIDRVLRSGFGTYPSPGRRRKEPPPAMLFPCPPCGREVELGEKGLTDCLRNLTLERI
VERYRHTVSLGSVAVMCQFCKPPQSLEATKGCADCQASFCNECFKLYHPWGTPRAQHEHV
QPTLNFRPKVLSCPEHDQERLHFYCRTCQRLLCPLCKLRRVHAGHKVAPVTQAYQTLKDK
ITKEMNYILSNQETVLGQISQLESATTQTEANSVAAREQLSQSVRDLTALLAERHASLSQ
ALEGARQRRGEALAGQVAERRSLLEHAGLMVFSQELLKETDPPCFVQAARQTHSRLSTSI
EGLQCFSLAADPSFRHFQLDVSKELKLLTDLQFIQAPLAPVIDTQKTLAYDQLFLCWRLP
QESAPAWHFSVEFRRRGVVPGGGARGGIQGRLAAARWGWQRLEEVGGTSAVIDRLEMDSV
YVLRVRGCNKAGFGEYSEEVYLHTPPAPVLNFYLDSRWGLHADRLVVSKEQRCARSVPGL
SLMQAADRALTSCHLTADLLVGDVAITQGRHYWACSVEPGSYLVKVGVGLEAKLQEWFHL
PQDMASPRYDPDSGHDSGAEDSLESPPPFSFLTMGMGKIFLPQAPNHQNNHGCNGTNPRR
SPTVANGNSPASSPTGLTYPLPPRLGVCLDFEKGRVTFYDAHSLRPLWEGPVDCSGPVCP
AFFFIGGGALQLQELVANRMADQTPVRRVTIQSRVTNLNN
NT seq 2463 nt   +upstreamnt  +downstreamnt
atgtcacacctccttgtagttgggcagaaatcccccccctttcagtttctagtatcacct
ctccgggagcaccgctctgattaccgcggaagaaacattcctatcatggcgcctagattc
cagctgaagtctaacgtgaagagcatggagtgcgagctgcattgcccagtgtgtaaggag
atcgtcaagcagcccgtggtcctgccatgtcagcacagcgtctgcctgatgtgtgcctca
gaggtcctggttcaaaatggctaccctgctccggagctgccacccgagcccaactctcct
gcctccacccccaacacccgctctccccgccaggcacgcaggcccatgtccagcaaggct
gaccatcgacccattgaccgcgtgctacgttcaggatttgggacgtatccgtcgccgggg
cgacggcgtaaggaaccgccccctgcgatgttgtttccgtgcccgccctgtgggagagag
gtagagctgggagagaagggcctgactgactgcctgcgtaacctcaccttggagcgcatt
gtagagaggtacagacacacagtgagcctaggcagtgtggctgtgatgtgtcagttttgc
aagcctccccagtccctggaggccactaagggctgcgccgactgccaagccagcttctgt
aacgagtgtttcaagctctaccacccctgggggacgccacgtgcccagcacgaacatgtc
cagcccaccctcaacttcaggcccaaggttctgtcgtgtcctgagcatgaccaggagcgt
ctgcacttctactgtaggacgtgccagcggttgctgtgcccgctctgcaagctgcgccgc
gtccacgccgggcacaaggtggcgccagtcacccaggcctaccagacactcaaggacaag
attaccaaggagatgaactacattctgtccaaccaggagacagtgctgggccagatctca
cagctggagagtgccaccactcagacagaggcgaatagcgtagcggcacgggagcagctg
tctcagagcgtgagagacctgaccgccctcctcgctgagcgccacgcctcattgtctcag
gccctggagggggcacggcagaggcggggcgaggcgttggcgggccaggtggcggagagg
cggagcctgctagaacatgcaggcctcatggtgttctcccaagagctgctgaaggagacg
gacccgccctgcttcgtccaggcagcgcgccagacacacagcaggttatccacgtccatt
gaagggctgcagtgtttctctctggccgctgatccctccttcagacacttccagctggat
gtctccaaagaactcaaactcctcacagacctgcagttcatccaggcccctctggcccct
gttatcgacactcaaaagaccctggcctatgaccagctcttcctgtgttggcggctgcct
caggaatccgcccccgcctggcacttctctgtggagtttcgtcgccggggggtggtgcca
ggaggcggggccaggggtggtatccaagggcgattggctgcggcccgctggggctggcag
cggctggaggaggtgggcggaaccagtgctgtgattgacaggttggagatggacagtgtg
tatgtgttgagggtgagaggctgcaacaaggcgggcttcggggagtacagtgaggaggtg
tacctacacaccccgccagcaccagtgttaaacttctacctggactctcgctggggtctc
catgccgaccggctggtggtgagtaaggagcagcgctgcgcccggagcgtccccggcctg
tccctgatgcaggccgccgaccgagcgctcacttcctgtcacctgactgcagacctcctg
gtgggcgacgtggccatcacccagggcaggcactactgggcatgctcagtggagcccggc
tcctatctggtcaaagtgggagtgggcctagaggccaaactacaggagtggtttcacctt
ccgcaagacatggccagtccccgttatgacccagacagtggccatgacagtggggcagag
gattccctggaatcccctccccccttctctttcctcaccatgggcatgggcaagatcttc
ctgccccaggctcccaaccatcagaacaaccacggttgcaacggcaccaacccccgccgc
agccccaccgtcgccaacggcaacagccctgcctcctcgcctacgggcctcacctacccc
ctgcctcccaggcttggggtgtgccttgactttgagaagggtcgcgtcactttctacgat
gcccactcgctccgtcctctgtgggaggggcctgtcgattgctccggccccgtttgcccg
gctttcttttttattggcggaggggcacttcagttacaggagttggtggccaatcggatg
gcagaccagactccagtcaggagggtcaccatccaatcacgtgtcactaatctgaataac
tag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (24)   
   KEGG ORTHOLOGY (1)   
   RefGene (20)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (5)   
   UniProt (1)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (11)   
   Pfam (11)   
All databases (47)   

Download RDF
DBGET integrated database retrieval system