KEGG   Salmo salar (Atlantic salmon): 106588642
Entry
106588642         CDS       T04363                                 
Name
(RefSeq) transcription initiation factor TFIID subunit 5-like
  KO
K03130  transcription initiation factor TFIID subunit 5
Organism
sasa  Salmo salar (Atlantic salmon)
Pathway
sasa03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:sasa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    106588642
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:sasa03021]
    106588642
   03036 Chromosome and associated proteins [BR:sasa03036]
    106588642
Transcription machinery [BR:sasa03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     106588642
   Coactivators
    SAGA/TFTC/STAGA complex
     106588642
Chromosome and associated proteins [BR:sasa03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     106588642
    STAGA complex
     106588642
    TFTC complex
     106588642
    SAGA complex
     106588642
    SLIK complex
     106588642
SSDB
Motif
Pfam: WD40 TFIID_NTD2 NBCH_WD40 ANAPC4_WD40 Nup160 PROPPIN RAB3GAP2_N VID27
Other DBs
NCBI-GeneID: 106588642
NCBI-ProteinID: XP_014033297
UniProt: A0A1S3Q037
Position
ssa02:51458630..51465283
AA seq 747 aa
MAAVQDGQLNLEVEKDIKTEITNDGSGNINANSSSPGSTSSGGKSKSPAGSGEDQQTLLA
VLQFLKRNKLTESVDILRREAGLSADDSPVSESAGAGSGGVPNVSADGGDANSLLSRVSM
ATPVAPPATAAPKVVAASGGEDQPDVNVVLSAYSQQGDPVLYPLYYNGLKKFIESVLDCH
RAELSQVFYPLFVHMYLELVYNNHENEAKQFFEKFSGDQECYYEEDLRILSSMSKKEHMK
GNETMLDFRTSKFVLRISRDSYQLLKRHLQERQNNQIWNIIQEHLYIDIFDGMPRSKSQI
DAMSGSLAGEGKRDANKAKVFYGLLKEPEIEVPLDDEDEEAENEEGKPKKKKPKKDSMGS
KSKKQDPNAPQQTRIPLPELKDSDKLDKIMNMKEATKKIRLGPENLPSICFYSFLNAYQG
LTAVDFTDDSSLIAGGFADSTVRVWSVTPKKLRRVKSAADLSNIDKESDDVLERIMDEKT
ASESKILYGHSGPVYGISFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQ
FSPYGYYFISGGHDRVARLWATDHYQPLRMFAGHLADITCTRFHPNSNYVATGSADRTIR
LWDVLTGNCVRILTGHKGPIHSLAFSPNGKFMASGATDGRVLLWDVGHGLMVGELKGHAD
TIYALKFSRDGEILASGSMDNTVKLWDTLKAFDDVELDDFTAATGHIHLPENSQELLLGT
YMTKSTPVIHLHFTRRNLLLAAGAYNP
NT seq 2244 nt   +upstreamnt  +downstreamnt
atggcggctgtgcaagatggtcagctcaatctggaggtcgaaaaagacataaaaacagaa
ataacaaacgatgggtctggaaatatcaatgcaaactcttcgtcacccggttctacgtct
tcgggcggtaaatcgaaatctcctgcgggatcgggtgaagatcaacagacactgctcgcg
gtgctgcaatttctcaagaggaataaattgaccgagtcggtcgacattttgcggcgagaa
gcgggcttatctgcagatgattccccggtatccgagtcggcgggagctggatcgggtggc
gtcccaaatgtcagtgctgatgggggggatgccaactctctcctcagccgagtgtcaatg
gccacccccgtcgcacccccggccaccgcagccccaaaagtggtggcagcatcaggtggg
gaagaccaaccagacgtcaacgttgtcttgtcggcctatagccagcagggggaccctgtc
ctctacccactctactataacggcctgaagaagtttattgagtctgtcctggactgccac
agagctgaactctcccaggtcttctacccactgtttgtccacatgtacctggagctggtc
tacaacaaccacgagaatgaggctaaacagttttttgaaaagttcagcggtgaccaggag
tgttactacgaggaggacctccgcatcctctcgagcatgtccaagaaggaacacatgaag
ggaaacgagaccatgctggacttcaggaccagcaagtttgtcctccgcatctcccgagac
tcctaccagctgctgaagaggcaccttcaggaacgtcagaacaaccagatctggaatatt
atacaggaacatctctatattgatatctttgacgggatgcctcggagtaaaagtcagatt
gatgccatgtcgggcagtctggctggggagggcaagagagatgccaacaaagccaaggtg
ttctatggtcttctgaaggagccagagatcgaggtgcctctggatgatgaggatgaggag
gcagagaacgaggagggcaaacccaagaagaagaaacctaagaaggacagcatgggctcc
aagagcaagaaacaggaccccaacgcaccccaacaaactagaatccccctccccgagctg
aaggactctgacaagctggacaagatcatgaacatgaaggaggccactaagaagatccgt
ctgggcccagaaaacctaccctccatctgtttctactccttcctcaacgcttaccagggt
ctgacagcggtggacttcacagatgactccagtctgatcgcggggggcttcgctgactcc
accgttagggtgtggagcgtcacccccaagaaactacgccgggtcaaatctgcagcagac
ctgagtaatattgataaagagtctgatgacgtgttggagaggatcatggatgagaagacg
gccagtgagtctaagatcctgtacggacacagtggaccagtatacggcatcagcttcagc
cctgacaggaactacctgttgtccagttctgaggacggtacggtcagactgtggagtctg
cagacgttcacctgtctggtggggtataaaggacacaactaccctgtctgggacactcag
ttctcaccctatggttactactttatctctgggggacatgaccgagtcgctcgtctgtgg
gcgactgaccactatcagcccctgcgtatgttcgctggtcacctggctgacatcacgtgc
acccgcttccaccctaactccaactatgtggccacgggttcagctgaccgtaccatccgc
ctctgggacgtcctgactggaaactgtgtccgcatcctcaccggtcacaagggccccatt
cattccctggccttctcccccaatgggaagttcatggcctcgggagcaactgatgggagg
gttctactgtgggatgttggtcacggcctcatggtcggagagctgaagggacatgctgac
accatctatgccctcaagttcagcagggacggagagatactagcctcaggctcaatggat
aacactgttaaactgtgggatacactgaaggcctttgatgatgtggagctggatgacttc
accgcggcaacaggtcacatccatctaccagagaactcccaggagctgttgctaggcacc
tacatgaccaagtccacccctgtcattcacctgcacttcacccgcaggaacctactgctg
gctgcaggggcctacaacccatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (16)   
   KEGG ORTHOLOGY (1)   
   RefGene (12)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (8)   
   Pfam (8)   
All databases (34)   

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