KEGG   Salmo salar (Atlantic salmon): 106600823
Entry
106600823         CDS       T04363                                 
Name
(RefSeq) protein CASC3-like
  KO
K14323  protein CASC3
Organism
sasa  Salmo salar (Atlantic salmon)
Pathway
sasa03013  Nucleocytoplasmic transport
sasa03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:sasa00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    106600823
   03015 mRNA surveillance pathway
    106600823
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sasa03019]
    106600823
Messenger RNA biogenesis [BR:sasa03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     106600823
SSDB
Motif
Pfam: Btz
Other DBs
NCBI-GeneID: 106600823
NCBI-ProteinID: XP_014047999
UniProt: A0A1S3R8B2
Position
ssa03:57722189..57739190
AA seq 772 aa
MADRRRRRRRASQDSEEDDESGSGSESGKSLSPTTKPRVRDPEPVEAPAVRVVPKNDAES
ECESEDGVGEAVLSDYESADPEENGSHSEGGEEEEEVVPPPAAEPKPSPAADTPAAEGEL
QEGGGKEEGEKGVSKEVKCEDKGNLAGERQSGDGQESTEDSENKGAKPGQKLDDDQDRNN
PAYIPRKGMFFEHDVRGNAQEEERPKGRNRKLWKDEGRWEHDRFREEEQAPKSREELVAI
YGYDIRNGGVSNERSYRQRKPRHSTSPVRDKRWRDGDGERPIHTSWQQGGNSNSRSAPLA
VALQQSGPPPSAAPNTQRNNNPPRPSSHPPPRGFQGNRPPQAQYRNDRNQESQRPGPKAH
PAEPLQTRSLPPMDGERGPRGRGNRGAHTERSSSVVVEEIRSEEDDERNTTTVTTSVYHN
RHYSGKGDRERDSAPRRQEQQRGGSAPPADNPVTRDASPAPERPVEKKSYSLARRTRTRA
TELDKQASLEEPASTASSSALTSEPWQGPGQSQGDAGDSSQATVLTGLDQDLARLSLAGQ
NWAQNPSSFLRAEMRGIPNSMHMGGAPPQYSNIEELGAGNRAKRYSSQRQRPSPEPAPPM
HIGVMESHYYEPMSYQGPIYAHGDSPAPLPPQGMLVQPEMHLPHPGHPGHPGLHPHQSSG
PMPNPALYAAPPVSMSPGQPPPQQLLAPPFYPPPGVMTFGNTNYPYPAGATLPPMYNPPA
QSQVYGQSQVYGGVTYYDPMQQQAQPKPSPPRRSSQPVTVKPPPPEVGYGPE
NT seq 2319 nt   +upstreamnt  +downstreamnt
atggcggaccggcgacggcgaaggaggcgcgcgtcccaggatagcgaggaggacgatgaa
tctggttcgggatcggaaagtggaaagtccctttcgccaacgacaaagccccgagtacgg
gatcctgagccagttgaggcaccagctgttcgtgtggtgccgaaaaacgatgctgaatcc
gagtgtgaaagtgaagatggcgtaggagaagctgtcctttctgactatgaaagtgcagat
cctgaggagaatggctcccattcagagggaggtgaggaagaggaggaggtggtccctcca
ccggctgctgagcccaaacccagtcctgctgctgacactcctgctgcagagggggagctg
caggaaggaggggggaaggaagagggtgagaaaggtgtgagtaaagaagtgaagtgtgaa
gataaaggcaacctggcaggggagcggcaaagcggggatggacaggaaagcacagaagac
tctgagaataaaggtgctaaaccaggccagaagctggatgatgaccaggaccgtaataac
ccagcttatatcccccgtaagggaatgttctttgagcatgacgtcagaggaaacgcacag
gaggaggaacggccgaagggtcgtaacaggaagctgtggaaggatgagggtcgctgggaa
cacgataggttcagggaggaggagcaggcgcccaagtcacgtgaggagctggttgcaatc
tatggctatgacatccgcaacggaggtgtctccaatgagcggtcctatagacagcgcaag
cccagacacagcacctctccagtccgggacaagcgctggcgggacggagatggggagagg
cccatccatacctcctggcagcagggagggaactccaacagccgtagcgctcccctagcc
gtggccctgcagcagtctggtcctcccccctcagcagcccccaacacccagcgcaacaac
aacccccccaggccctcctcccaccccccaccccgtggcttccagggcaaccgccccccc
caggcccagtacaggaatgacagaaaccaggagtctcaacggccaggccccaaggcccac
cccgccgagcccctccagacccggagcctaccgcccatggacggggaacgaggccccagg
ggccgggggaacagaggggcccatacggagcgcagctcttcggtagtggtggaagagatc
cgcagcgaggaggatgacgagcgtaacacaactacagtgacaacgtccgtctaccacaat
cgccactacagtggcaagggagatcgagaaagggactctgcgccacggcgacaggagcag
cagcgagggggatctgctcctccggcggacaacccggttacccgcgatgcctccccggct
ccggagcggcccgtggagaagaagtcgtactccctagccaggaggactcgcacccgggcc
actgagctggacaagcaggcctctcttgaggagcctgcctccaccgcgtcttcctcggca
ctgacgagtgagccgtggcagggccccggtcagagccaaggggatgctggagacagtagc
caggcgacggtactcacagggctggaccaggacctggccagactcagcctggccggacag
aactgggcccagaacccatcttcgtttctacgtgctgagatgaggggcatccctaactct
atgcacatgggtggagcacctccacaatacagtaacatagaagagctgggagctggtaac
cgggcaaagcggtactcgtcccagcgccagaggccaagcccggagcccgctcctcctatg
cacataggggtcatggaaagccactactacgagcccatgtcttaccaaggaccaatctat
gcccacggcgacagccccgcccctctcccaccccagggcatgctggtccagcctgagatg
cacctcccccacccaggccatccaggacacccaggtctacacccccaccagtccagcggc
cccatgcccaacccggctctctacgctgctccccccgtctccatgtcccctggacagccc
cctccacagcagctgctggccccgcccttctaccctccgccaggtgtcatgacctttggg
aacaccaactacccctacccggcaggagccaccctgccccccatgtacaacccgccggcc
cagtcgcaggtgtacggccagtcgcaggtgtacggtggggtgacgtactacgatccgatg
cagcagcaagcccagcccaaaccctcgcctccccggcgctcctcccagcccgtcaccgtc
aaacctcccccgccagaggtagggtacggcccggagtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (53)   
   KEGG ORTHOLOGY (1)   
   RefGene (49)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (1)   
   Pfam (1)   
All databases (64)   

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