KEGG   Salmo salar (Atlantic salmon): 106601225
Entry
106601225         CDS       T04363                                 
Name
(RefSeq) probable ATP-dependent RNA helicase DDX17
  KO
K13178  ATP-dependent RNA helicase DDX17 [EC:5.6.2.7]
Organism
sasa  Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:sasa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:sasa03041]
    106601225
Enzymes [BR:sasa01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     106601225
Spliceosome [BR:sasa03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   RNA helicase-like proteins
    106601225
SSDB
Motif
Pfam: DEAD Helicase_C ResIII
Other DBs
NCBI-GeneID: 106601225
NCBI-ProteinID: XP_014048734
UniProt: A0A1S3RAH4
Position
ssa03:complement(65256929..65271846)
AA seq 631 aa
MRGGSSYGDRDRDRGRDRGSPRFGSSRGPPPNKKFGNPGERLRKKKWDLNELPKFEKNFY
NEHPDVQRMSQYDLEEFRRKKEITIRGSGCPKPVSSFSQAHFPQYVMDVLIQQNFKEPTA
IQAQGFPLALSGRDMVGIAQTGSGKTLSYLLPAIVHINHQPYLERGDGPICLVLAPTREL
AQQVQQVAHEYGKSSRIKSTCVYGGAPKGPQIRDLERGVEICIATPGRLIDFLEAGKTNL
RRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKDVRQLAEDFLKDYVQ
INVGALELSANHNILQIVDVCTEIEKDNKLLQLMEEIMAEKENKTIIFVETKKRCDDLTR
RMRRDGWPAMCIHGDKTQPERDWVLTEFRSGKAPILIATDVASRGLDVEDVKFVINYDYP
NSSEDYIHRIGRTARSTNKGTAYTFFTPGNLRQARELIRVLEEARQAINPKLLQLVNTGR
GGGGRSRFHGNGSNANNPNLMYQDECNRSMRTVGSKDSRGSSGSFSRDSRDGGSSRAGDR
SSSSYRDRRDSRSYGSSSSYNQYKSGSSNGGQDQSAGQFSSVSRSSQPPPPPSGPQPLMA
QKFTPTQPMMGLMGHSPFQFAPPPTPTSQRK
NT seq 1896 nt   +upstreamnt  +downstreamnt
atgaggggcggttcgtcgtatggagatcgggacagggaccgtggtcgcgacagggggagt
cctcgttttgggtctagcagaggtccccctcccaacaagaagtttgggaacccaggggag
cgtttgcgcaagaagaaatgggacctaaacgagcttccaaagtttgagaagaacttttac
aatgaacatccagatgtccagcgcatgagccagtatgacttggaggagtttcgcaggaag
aaggaaatcactatcagggggtcaggctgcccgaaacctgtcagtagcttctcccaggcc
cattttccccagtatgtgatggatgtgctgatacagcagaactttaaggagcccacagct
atccaggcacaaggcttccctctggccctgagtggcagggacatggtgggcatcgcacag
acaggttctgggaaaaccttatcgtatctcctgcctgccattgtgcacattaaccaccag
ccctacctagaaagaggagacggaccaatctgtttggttctggcaccaactcgagagctg
gcccagcaggttcagcaagtggcgcatgaatacggaaagtcatcacgcatcaagagcacc
tgtgtctacgggggagcgcccaagggaccccagatccgggacctggagagaggtgttgag
atctgcatcgccaccccgggtcgtctcattgacttcctggaggcagggaagaccaaccta
cggcgctgcacctacttggtgctggacgaggctgacagaatgctggacatgggctttgag
ccacagattcgcaagattgttgaccagattaggcctgacaggcagaccctgatgtggagt
gccacctggcccaaggacgtgcggcagctagcagaggacttcctgaaggactatgtccag
atcaacgtgggagccctggagctgagcgccaaccacaacatcctgcagattgtggacgtg
tgcacggagattgagaaggacaacaagctgctccagctgatggaggagatcatggctgag
aaggagaacaagaccatcatctttgtggagaccaagaaacgctgcgatgatctgacccgc
agaatgagacgcgatgggtggccagcgatgtgtatccatggtgacaagactcagccggag
agagactgggtgctgacagagttccgtagtggcaaggctcctattcttattgctactgat
gtggcctcacgtggtttggatgtggaggatgtcaaatttgtcatcaattatgactaccca
aactcctctgaggactacatccaccgtatcggccgtacggcccgtagcaccaacaagggt
acggcctacacattcttcaccccgggcaaccttcgtcaggcccgtgagctgatccgtgtg
ctagaggaggcccggcaggccataaaccccaagctgctgcaactggtcaacactggccgt
ggaggaggaggcaggtcacgtttccatggcaacggctccaacgcaaacaaccccaacctg
atgtatcaggatgagtgcaaccggagcatgcgcaccgtaggcagcaaggacagccggggg
agcagcggcagcttcagccgcgacagccgagatggagggagcagccgcgccggggacagg
tcgtcctcttcctacagggacaggagggacagccgcagctatggctccagctcctcctac
aaccagtacaagtccgggagcagcaatggggggcaagaccagtcagcgggacagtttagt
tcagtcagcaggtccagtcagccccctccacccccctcagggccgcagcccctcatggcc
cagaagtttaccccaacccagcccatgatgggattaatggggcactcgcctttccagttt
gctcccccacccactccaacctcacagaggaagtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (39)   
   KEGG ORTHOLOGY (1)   
   RefGene (35)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (4)   
   RefSeq(nuc) (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (3)   
   Pfam (3)   
All databases (54)   

Download RDF
DBGET integrated database retrieval system