KEGG   Salmo salar (Atlantic salmon): 106602566
Entry
106602566         CDS       T04363                                 
Name
(RefSeq) pleiotropic regulator 1-like
  KO
K12862  pleiotropic regulator 1
Organism
sasa  Salmo salar (Atlantic salmon)
Pathway
sasa03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:sasa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    106602566
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:sasa03041]
    106602566
   03400 DNA repair and recombination proteins [BR:sasa03400]
    106602566
Spliceosome [BR:sasa03041]
 Complex B
  Other components
   Prp19 complex
    106602566
 Complex C
   Prp19-CDC5 complex
    106602566
DNA repair and recombination proteins [BR:sasa03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    106602566
SSDB
Motif
Pfam: WD40 NBCH_WD40 ANAPC4_WD40 WDR54
Other DBs
NCBI-GeneID: 106602566
NCBI-ProteinID: XP_014050743
UniProt: A0A1S3REJ2
Position
ssa04:complement(16875059..16883302)
AA seq 513 aa
MTEDVQKHSVHTLVFRSLKRTHDMFVADHAKPVSLDETSHKVKMAAKLRADYSAVLHMPV
LKEGKDRPLGSNMHGNQNYAQPGDDPEYLITGTHAYPSGPGVALTADTQIHRNPSKGGVH
AMALALPPSQARLDASRTAASVGDIHRHAGGAERSPAPHSHAMSLLEGGGTKNSSLVARK
APTMPKPQWHAPWKLFRVISGHLGWVRSIAVEPGNQWFVTGAGDRTIKIWDLASGKLKLS
LTGHISTVRGVAVSTRSPYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYDLDLHPTID
VLVTCSRDATARVWDIRSKANVHTLSGHTNTVATVRCQAAEPQIITGSHDSTIRLWDLIA
GKTRATLTNHKKSVRALALHPRQYTLASGSADNIKQWTFPDGNFIQNLSGHNAIINAMAV
NSDGVLVSGADNGTIHLWDWRTGYNFQRIHAAVQPGSLDSESGIFACMFDNSESRLITAE
ADKTIKVYKEDDTATEESHPINWKPEILKRKRF
NT seq 1542 nt   +upstreamnt  +downstreamnt
atgactgaggatgtgcaaaagcactctgtgcacacgctcgtgttcaggtccctcaagaga
actcatgatatgtttgtagctgaccatgccaaaccagtctccttggatgaaacaagtcac
aaggtgaagatggcagcgaagctaagggcagactacagtgccgttctacacatgcccgtt
ctgaaagagggcaaggacaggccactgggctccaacatgcatggcaatcagaactatgcc
caacctggtgatgatccagagtacttgataactgggacccacgcatacccctcaggacct
ggggtggctctgacggcggacactcagatacataggaaccccagtaaggggggagttcac
gccatggctcttgccctgccgccatcacaagccaggctggacgccagtcgcactgcagcc
agtgtcggggacattcacagacacgcggggggggcagagaggtctcccgctcctcactca
cacgctatgtctcttttggaaggaggcggcaccaaaaactcgtccctcgttgccagaaaa
gcccccactatgcccaagccccagtggcacgctccatggaagctgtttcgggtcatcagt
ggtcatcttggctgggtgaggtccattgccgtagagcccggcaaccagtggtttgtgacc
ggcgctggcgacagaaccattaagatctgggacctggccagtgggaagctaaagctctcc
ctgacgggacacatcagcacggtgcgcggcgtggccgtgagcacccggagcccctacctg
ttctcctgcggcgaggacaagcaggtcaagtgctgggatctggagtacaacaaggttatc
aggcactaccacggccacctcagtgccgtgtacgacttggacctgcacccaaccatcgac
gtgctggtcacatgcagtcgagatgccacagccagggtgtgggatatcaggagcaaagcc
aacgtgcacaccctgtccggacacaccaacacagtggccacagtcagatgccaggccgcc
gaaccgcagatcatcacagggagccacgactccaccatcaggctatgggatctgatagct
gggaagaccagagccactctcaccaaccacaagaagtctgtcagagcactggccctacat
cccagacagtataccttagcctctggctctgccgacaacatcaagcagtggacgttccca
gatggcaacttcatccagaacctctctggacacaacgccatcatcaacgcaatggcggtc
aactcagacggcgtgctggtatcaggagctgacaacggcaccattcacctgtgggactgg
cggacaggctacaacttccagcgtatccacgccgccgtgcagcccggctcactggacagc
gaatcggggatcttcgcctgcatgttcgacaactcggagagcaggctgatcacggccgag
gccgacaagaccatcaaggtgtacaaagaggacgacacggcgaccgaggaaagccaccca
ataaactggaaaccggagatcctcaagaggaaaagattctag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (23)   
   KEGG ORTHOLOGY (1)   
   RefGene (19)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (4)   
   Pfam (4)   
All databases (37)   

Download RDF
DBGET integrated database retrieval system