KEGG   Salmo salar (Atlantic salmon): 106604249
Entry
106604249         CDS       T04363                                 
Name
(RefSeq) caltractin-like
  KO
K10840  centrin-2
Organism
sasa  Salmo salar (Atlantic salmon)
Pathway
sasa03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:sasa00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    106604249
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sasa03019]
    106604249
   03036 Chromosome and associated proteins [BR:sasa03036]
    106604249
   03400 DNA repair and recombination proteins [BR:sasa03400]
    106604249
Messenger RNA biogenesis [BR:sasa03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX-2 complex
     106604249
Chromosome and associated proteins [BR:sasa03036]
 Eukaryotic type
  Centrosome formation proteins
   Centriole proteins
    106604249
   Centrosome duplication proteins
    Centriole replication proteins
     106604249
DNA repair and recombination proteins [BR:sasa03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     XPC-HR23B-CETN2 complex
      106604249
SSDB
Motif
Pfam: EF-hand_7 EF-hand_1 EF-hand_6 EF-hand_8 EF-hand_9 AIF-1 EF-hand_5 EF-hand_4 SPARC_Ca_bdg SurA_N_3 Dockerin_1 SUB1_ProdP9 TerB RTP LETM1_RBD TRCF DUF3008 MJ1010-like_2nd MgtE_N
Other DBs
NCBI-GeneID: 106604249
NCBI-ProteinID: XP_014054190
UniProt: A0A1S3RPD9
Position
ssa05:complement(9764469..9770104)
AA seq 173 aa
MATSVKRPSLGPVPPPRKKSNPKTELTEELKQEIREAFELFDTDASGYIDVKELKVAMRA
LGFEPKKEEIKRMITEVDKDETGKISFSDFLTVMTQKMAEKDSKEEILKAFRLFDDDETG
KISFRNLKRVAKELGESLTDEELQEMIEEADRDGDGEVNQGEFLRIMKKTSLY
NT seq 522 nt   +upstreamnt  +downstreamnt
atggcaaccagtgtaaagaggccgtccctgggtccggtccctccccccaggaagaagtcc
aaccccaagacggagctcactgaggagctgaaacaggagatcagagaggcctttgaactg
ttcgacactgacgcctctggatacatcgatgtcaaggagctaaaggttgctatgagggcg
ctggggtttgagccgaagaaagaggagattaagaggatgataacggaggtggataaggac
gaaacaggaaagatctccttctctgatttcctcaccgtcatgactcagaagatggctgag
aaggattctaaggaggagatcctgaaagcattccgtctgtttgatgacgatgagacaggg
aagatctccttcagaaacctgaagagggtcgctaaggaactgggagagagcctgactgac
gaggaactgcaggagatgatcgaggaggcagacagagatggagacggagaggtgaaccag
ggagagttcctccgcatcatgaagaagaccagcctgtactga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (32)   
   KEGG ORTHOLOGY (1)   
   RefGene (28)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (19)   
   Pfam (19)   
All databases (60)   

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