KEGG   Salmo salar (Atlantic salmon): 106605109
Entry
106605109         CDS       T04363                                 
Name
(RefSeq) replication protein A 32 kDa subunit-like
  KO
K10739  replication factor A2
Organism
sasa  Salmo salar (Atlantic salmon)
Pathway
sasa03030  DNA replication
sasa03420  Nucleotide excision repair
sasa03430  Mismatch repair
sasa03440  Homologous recombination
sasa03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:sasa00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    106605109
   03420 Nucleotide excision repair
    106605109
   03430 Mismatch repair
    106605109
   03440 Homologous recombination
    106605109
   03460 Fanconi anemia pathway
    106605109
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sasa03032]
    106605109
   03400 DNA repair and recombination proteins [BR:sasa03400]
    106605109
DNA replication proteins [BR:sasa03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RPA (replication protein A)
    106605109
DNA repair and recombination proteins [BR:sasa03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    RPA (replication factor A)
     106605109
   MMR (mismatch excision repair)
     106605109
  DSBR (double strand breaks repair)
   HR (homologous recombination)
     106605109
SSDB
Motif
Pfam: RPA_C tRNA_anti-codon SelB-wing_2
Other DBs
NCBI-GeneID: 106605109
NCBI-ProteinID: XP_014055902
UniProt: A0A1S3RVN8
Position
ssa05:complement(50183197..50194755)
AA seq 278 aa
MWNQGGSYGDSNMGGGYTQSPGGFASPAASQGGEKKGRQRAQQIVPCTVSQLMSAAQAED
VFRVGEVEVAQVTIVGIIRTTDKSMTNIQYKVDDMTGAPMDVKQWVDTEDPSVDSTVIPP
GTYVKVSGNLRSFQNHRSVVAFSVRPLEDMNEITSHMLEVVQAHVLLSKPQNIMMGGGGG
MNTSMVPMSRPGMGGNMGGGYSGANDMSANGLIPSQNQVLSLIRSCPDAQGISTQDLKQR
LSGMSLAVIKHAVEFLSNEGHIFSTIDEDHFKSTDNDD
NT seq 837 nt   +upstreamnt  +downstreamnt
atgtggaaccaaggtggatcatacggtgattcaaacatgggtggtggatacactcagtcc
ccgggaggattcgcatcacctgctgcctcccagggaggagagaagaaagggagacaacgt
gcccaacagattgtcccctgcacagtgtcccagctcatgtctgctgcccaagcggaggat
gttttcagagtgggagaggtagaggttgcccaggttaccattgtgggcatcatcagaacc
actgacaaatccatgaccaacatccagtacaaagttgatgacatgacaggggcccctatg
gacgtgaagcagtgggtagatacggaggatcccagtgtggacagcacagtcatcccccca
ggcacttatgtcaaggtctctggcaatttgcgctccttccagaaccacaggtccgtggta
gcgttcagcgtccggcccctagaggacatgaacgagatcacctcccacatgctggaggtg
gtgcaggcacacgtgctgctcagcaaaccacagaatattatgatgggcggaggaggggga
atgaacactagcatggtgcccatgtcgcggccgggaatgggtggcaacatgggaggtgga
tattcgggtgccaacgacatgtccgctaacggcctgatcccaagccagaaccaggtgctg
agcttgataaggagctgtccagacgcacagggtatcagcacacaggacttgaagcagaga
ctcagcggcatgagcttggctgtcatcaagcatgcagtggagttcctcagcaacgaagga
cacatcttctccaccattgacgaggatcacttcaagtctacggacaatgacgactaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (5)   
   KEGG PATHWAY (5)   
Genome (1)   
   KEGG GENOME (1)   
Gene (16)   
   KEGG ORTHOLOGY (1)   
   RefGene (12)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (3)   
   Pfam (3)   
All databases (33)   

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