KEGG   Salmo salar (Atlantic salmon): 106608018
Entry
106608018         CDS       T04363                                 
Symbol
smc6
Name
(RefSeq) structural maintenance of chromosomes 6
  KO
K22804  structural maintenance of chromosomes protein 6
Organism
sasa  Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:sasa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sasa03400]
    106608018 (smc6)
DNA repair and recombination proteins [BR:sasa03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    SMC5-SMC6 complex
     106608018 (smc6)
SSDB
Motif
Pfam: SMC_N AAA_23 AAA_13 AAA_15 AAA_21 TMF_TATA_bd AAA_29 Crescentin
Other DBs
NCBI-GeneID: 106608018
NCBI-ProteinID: XP_014061122
UniProt: A0A1S3S9V4
Position
ssa06:67300580..67323140
AA seq 1090 aa
MSKRKSNSIGESPHKRVRPTEVHDEDNEVGPSQPVPLGSHTTVGEVGIVESISLKNFMCH
SLLGPFAFGSNVNFVVGNNGSGKSAVLTALMVGLGGKATTTNRGSSLKGFVKEGESSADV
SITLRNKGRDAYKPEVFGQAIIVDLKITREGMRTYKLKSKAGHLVSAKKDELLAILDHFN
IQVDNPVSMLTQEMSKHFLHSKGEGDKYRFFMKATQLEQMKEDYTYIITTKNVTLDTVEK
HEECLEGLKRKYLEKEDRVKSLASLDDMHSKLEELKNQMAWALVSEMEKEVKPMREKLQS
EERSTVKYDQKVDEWKAKVVEAEKKYMGIREQLEAITVRVQQLEPQSAELKNEAQSRSKA
FNTAQASVHRFKTNLRDLEKDKDQLSRRINELKLSINQTSGAETQVRVERMEKLQTDLDT
LNFQDSTLGQQMEQFQQAVSRAKDELEKMMREEEDLKRSMEAIRRKLQTMEGSRSDRLRR
FGEKMPALLAAIEDADRKGQFRKKPVGPLGYCIRLKDHEQALAVEKCLGSLMVAFTCDNH
EDEKLLQGLMRGYYQGGRRPQIITCQFFNRVHDTNRRAVNHPDYPSVLQSLEIEDPVVAN
CLIDQRGIETILLIKSPAEARRVMQGRQPPRNCYQAFTKEGDQCYNNRYYSNDQRRCDYL
SRDVEEEIRQLQEEMRNKEAHLDRFSQQKQRVEEDIRNNNGLLKRAYDDRKRAKDKFRRL
QQEISDLQNVEEPQSEDLKPLEEELEEINNKISAGRAESEEARRKMAQLKASWEEVEQRY
RQHKDSISTVAEEAEPIKEELSKSDQDVEKSKHHKKHYEDKRKVHINTIQALKASLELKE
QELTASVVKATEICPERSEVRRTARSLDSEISRLKLKISTQQDQQGDREEVIRQYQEALE
NYSNINQQVKCLKRFIQVLCKIMDDRHRVYTELRRFLSVRCKMYFDSMLSQRGYIGKMMF
EHKNETLSISVQPGVGDKAALSDMRSLSGGERSFSTVCFVLSLWAIAEAPFRALDEFDVY
MDMVNRRISMDMMLKIASSQRYRQFIFLTPQSMSSLPVNNLIRILRLKDPDRGQAALPFG
QRNEEEEEEE
NT seq 3273 nt   +upstreamnt  +downstreamnt
atgtctaagaggaagagcaactcaattggagagagcccacacaagagagtcagacccaca
gaggttcatgatgaagataatgaagtgggtcccagccaacctgtgccgttaggatcacat
acgactgttggagaggtgggcatagtggagagcatctccctgaagaactttatgtgccac
tctctgctggggccatttgcgtttgggtccaatgtcaactttgtcgtcggcaacaatgga
agtggaaagagtgctgtcctcacagctcttatggtgggcctgggagggaaagctacaacc
acaaacagagggtcctccctaaagggatttgtgaaagaaggagagagttcagctgacgtc
tccataacactgcgtaacaagggcagggatgcctacaagccagaagtgttcggccaggct
atcatagtagacctcaagataacccgtgagggcatgaggacctacaagctcaagagcaaa
gcaggtcatcttgtgtctgcgaagaaggatgaacttttggccattctggatcactttaac
atccaggtggataaccctgtatctatgctaacacaagagatgagcaagcactttctgcac
tccaaaggagaaggggataagtacagattctttatgaaagccacacagcttgagcagatg
aaagaggattacacctatatcataacgactaaaaatgtcactctagacactgtggagaaa
cacgaggagtgtctggaggggttaaagaggaagtacctggagaaagaggaccgggtcaaa
agcctggcctcgctggacgacatgcacagtaaactggaggagctgaagaatcagatggct
tgggctctggtgtctgagatggagaaagaggtgaagcccatgagagagaagctccaatca
gaggagaggtccaccgtcaaatacgaccagaaagtagacgagtggaaggccaaggtggtg
gaggcggagaagaagtacatgggtatccgggagcaactggaggcaatcactgtgagggtg
cagcagcttgagccacagagtgctgagctgaagaatgaggctcagagcagaagcaaggcc
ttcaacacagcccaggccagtgtacacagattcaagaccaatctgagagacctggagaag
gacaaggatcagctctccaggagaattaatgagctcaagttgagtatcaaccagacatct
ggtgcggagacccaggtgcgtgtggagcgcatggagaagctgcagacagacctggacact
ctgaacttccaggactccaccctaggtcagcagatggaacagttccagcaggctgtgtcc
cgggccaaggacgagctggaaaagatgatgcgagaggaggaggacctgaagaggtctatg
gaggccatcaggaggaagttgcagaccatggagggcagccgctccgaccgcctgcgccgc
ttcggggagaagatgcccgcgctgcttgccgccatcgaggacgccgacaggaagggccag
ttcaggaagaaaccagtgggaccgctggggtactgtatccgtctgaaggaccatgagcag
gccctggccgtggagaaatgtctggggagcctgatggtggccttcacctgtgacaaccac
gaggacgagaagttgctgcagggcctcatgagagggtactaccaggggggtaggagaccc
cagatcatcacctgccagttcttcaacagggtccatgacaccaataggcgggctgtgaac
caccctgactacccgtcagtcctacagtctctggagatcgaggacccagtggttgccaac
tgcctcatcgaccagaggggcatagagaccattctgctcatcaagagtcctgcagaagcc
cgcagagtgatgcagggcaggcagccccctagaaactgctaccaggccttcaccaaggag
ggagaccagtgctacaacaaccgctactactccaacgaccagaggaggtgtgactacctt
agcagagacgtagaggaagagatcaggcagttgcaggaagagatgcggaacaaggaggcc
cacttggatcggttcagccagcagaagcagagggtggaggaggacatcaggaacaacaac
ggtctcctaaagagggcctacgacgacaggaagagggccaaggataagttcaggaggctg
cagcaggagatcagtgacctgcagaacgtggaggaaccccagtctgaggaccttaagcct
ctggaggaggagctggaggagatcaacaataagatttcagcaggtcgtgctgagagtgag
gaggcccgtagaaagatggcccagctgaaggcttcctgggaggaggtggagcagaggtac
cgccagcacaaagactccatcagcaccgtggccgaggaggccgaacccatcaaggaggag
ctgagtaagagcgaccaggatgtggagaagagcaagcaccataagaaacactacgaggac
aaacgcaaggtccacatcaacaccatacaggccctgaaggccagcctggagctcaaggag
caggagctcacggcgtctgtagtgaaggccacagagatctgtccagagcggtccgaggtg
cgccggacagccaggagtctggacagcgagatcagccgtctgaagctgaagatcagcacc
cagcaggaccagcagggagaccgcgaagaagtcatcaggcaataccaagaggccctggag
aactacagtaacattaaccagcaggtgaagtgcctcaagcgcttcatccaggtcctgtgt
aagatcatggacgacagacaccgagtctacacagagctgaggaggtttctctcagtgcgt
tgcaagatgtactttgactccatgctgtcacagagaggctatatagggaagatgatgttc
gagcacaagaacgaaaccctatccatctcagtccagccaggtgtgggggataaggctgcc
ctgagtgacatgcgctctctgtctggaggagagcgctcgttctccactgtctgtttcgtt
ctctctctctgggccatcgctgaggcccccttccgtgccctcgatgagtttgacgtctac
atggacatggtgaaccgaaggatatccatggacatgatgttgaagatcgcttctagccaa
cgttaccggcagttcatattcctcaccccacagagcatgagctctctcccagtcaacaac
ctgatccggatcctgcggctgaaagacccggaccgtggccaggcggctcttccctttgga
cagaggaatgaggaagaggaagaggaggagtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (53)   
   KEGG ORTHOLOGY (1)   
   RefGene (49)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (6)   
   RefSeq(nuc) (2)   
   GenBank (2)   
   EMBL (2)   
Protein domain (8)   
   Pfam (8)   
All databases (73)   

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