KEGG   Salmo salar (Atlantic salmon): 106608227
Entry
106608227         CDS       T04363                                 
Name
(RefSeq) transcription initiation factor IIA subunit 1-like
  KO
K03122  transcription initiation factor TFIIA large subunit
Organism
sasa  Salmo salar (Atlantic salmon)
Pathway
sasa03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:sasa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    106608227
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:sasa03021]
    106608227
Transcription machinery [BR:sasa03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIA
     106608227
SSDB
Motif
Pfam: TFIIA HSP90 DUF5701
Other DBs
NCBI-GeneID: 106608227
NCBI-ProteinID: XP_014061535
UniProt: A0A1S3SB26
Position
ssa06:78206851..78223493
AA seq 413 aa
MASSANSNQVPKLYRSVIEDVINEVRELFLDEGVDEQVLMELKTLWENKLMQSKAVEGFN
TDEQAALQAAAQQQAQQAQQATQQAQTQQVLLPPQQQVTSWQSTRPTVTSAPQQQVIVQD
PKILQHMSATGMNAATTAATLALPTGISPYQQLITSQGGNLPQNMYLKTVDGQILQVLRA
ANGTQYIIQPQQQMVLQQQVLPQMQPGGGQAPVIQQVRPITQVLAPLQGGLPQVLAPLQG
GLPQQTGVIIQPQQVILTGNKVQQNAQVMQMTGQPGQVQQIQQQVQQVQQVQGGAAPGGP
QQQQQPAMMLQVDGAGDTSSEEEDEEEEYDEEEDEEKEKDGEDGQVEEEPLNSEDDVSDE
EDQELFDTENVVVCQYDKIHRSKNKWKFHLKDGIMNLNGRDYVFSKAIGDAEW
NT seq 1242 nt   +upstreamnt  +downstreamnt
atggcgagctcggctaactcgaatcaagtgcctaaactgtacaggtctgtgattgaagat
gttatcaacgaggtccgggagctcttcctggatgagggggtggacgagcaggtcctcatg
gaactcaaaacgctgtgggagaacaagctaatgcagagtaaggcagtggagggcttcaac
acagatgagcaggcggccctccaggcagcagcccagcagcaggcacaacaggcccagcag
gccacccagcaagcccagacacagcaggtcctcctgcccccgcagcagcaagtgacaagc
tggcaatcgacccggcctactgtcaccagcgcaccccagcagcaagtcattgtgcaggat
cctaaaattctgcagcatatgagtgcaacagggatgaatgcagcaaccacagcagcaacc
ttggccttaccaacaggaatcagtccctaccaacaactcatcactagccaaggcggcaat
ttgccccagaatatgtatcttaaaacagtggacggtcagatcctccaggtgctgcgtgcg
gctaacgggacccagtacattatccagcctcagcagcagatggtccttcagcagcaggtc
cttcctcagatgcagcctggcggtgggcaggcccccgtcatacagcaggtacgccccatc
acacaggtactggctcctctccagggaggactcccccaggtgctggctcctctccaggga
ggcctcccccagcagacaggagtcatcatccagcctcaacaggtcatcctcactgggaac
aaggtccagcagaatgcacaggtaatgcagatgacaggccagcccggtcaggtgcagcag
atccagcagcaggtccaacaagttcaacaggtccagggcggagctgcaccaggaggtcca
cagcaacagcagcagcctgctatgatgctgcaggtggacggagcgggggacacgtcctca
gaggaagaagatgaggaggaagagtatgacgaggaggaagatgaagaaaaggaaaaagat
ggagaggacggccaggtggaggaggagcctctgaatagtgaagatgatgtgagtgatgag
gaggaccaagaactgtttgatacagagaacgtggtggtgtgccagtacgacaagatccac
agaagtaagaacaaatggaagttccacctgaaggatgggatcatgaacctgaacggccga
gactacgtcttctccaaagccatcggggacgcagagtggtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (29)   
   KEGG ORTHOLOGY (1)   
   RefGene (25)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (5)   
   UniProt (1)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (3)   
   Pfam (3)   
All databases (45)   

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