KEGG   Salmo salar (Atlantic salmon): 106611481
Entry
106611481         CDS       T04363                                 
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM9-like
  KO
K10649  tripartite motif-containing protein 9/67
Organism
sasa  Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:sasa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:sasa04131]
    106611481
   04121 Ubiquitin system [BR:sasa04121]
    106611481
Membrane trafficking [BR:sasa04131]
 Exocytosis
  Calcium ion-dependent exocytosis
   Others
    106611481
Ubiquitin system [BR:sasa04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    106611481
SSDB
Motif
Pfam: zf-B_box fn3 zf-C3HC4_4 zf-RING_UBOX PRY zf-C3HC4_3 zf-C3HC4 zf-RING_5 SPRY zf-RING_2
Other DBs
NCBI-GeneID: 106611481
NCBI-ProteinID: XP_014067194
UniProt: A0A1S3SS87
Position
ssa09:47959178..47960129
AA seq 664 aa
MDEMEEELKCPVCGSFFREPIILPCSHNICLACARNILVQTPDAESPQSSRASGSGLSDY
DYLDLDKMSLYSEADSGYGSYGGFVSAPTTPCQKSPNGVRVFPPAVPQPPAQHHLLGHPG
SLLPIPRNSCITCPQCHRSLNLDERGLRGFAKNRVLEGVVDRYQQSKAAALKCQLCEKSP
KEATVMCEQCDVFYCDPCRLRCHPPRGPLAKHRLVPPAHGRVNRRTSPRKISTCTEHELE
NLSMYCVQCKMPVCYQCLEEGKHGTHEVKALGAMWKLHKGQLSQALNILSDRATEAKEFL
VQLRNMVQHIQPADGPGRPLLVTSGWGTLKENGVEFEACLVAQCDALIDALNRRKAQLLT
RVNKEHEHKLKVVRDQISHCTVKLRQTTGLMEYCVEVIKENDPSGFLQISDALIRRVHMT
EDQWGKGTLTPRMTSDFDLTLDSGPLLQTIHQLDFIQMKVPSAPMLQLEECCTINNSATL
SWKQPPLSTIAVDGYILELDDGNGGQYREVYVGTETICTVDGLHYNSTYMSRVKAFNASG
VGQYSKILAMQTSEIAWFTFDPASAHPDIILSNDNLTVTCNSYDDRVVMGNSGFSRGVHY
WEITVDRYDNHPDPAFGVARGDVLKDVMLGKDDRAWAMYVDNNRSWFMHNNSHTNRTDGG
VSEE
NT seq 1993 nt   +upstreamnt  +downstreamnt
atggatgaaatggaagaagaattaaaatgccccgtctgcggatcttttttccgggagccg
atcattctaccgtgttcccacaacatttgcctggcttgcgctcggaatatcctagtacag
accccagacgccgaatctccacagagtagccgtgcgtctggctcggggctatctgattat
gactatctagacctggataagatgagcttgtacagcgaggcggacagtgggtatggctcc
tatggtggattcgtaagtgccccgaccaccccttgccagaaatccccaaatggtgtgcgt
gtattcccccctgccgtaccccaacctcctgctcagcaccacttactaggacaccccggc
tctctactccctatcccccgaaactcctgcatcacctgcccgcaatgccatcgcagcctc
aacctggacgaaagggggctccgcgggtttgccaagaaccgggtgctggaaggggttgtg
gaccggtaccagcagagcaaagcagccgccctaaagtgtcagctctgcgagaagagtccc
aaagaggccactgtgatgtgcgagcaatgtgacgtgttctactgtgacccttgtcgcttg
aggtgccacccccctcgaggtccgctagccaagcatcgcctcgtgcccccggcgcacggc
cgggtaaaccgtcggacaagtccccggaagatctccacctgtacagagcacgaacttgag
aacctgagcatgtactgtgttcagtgcaagatgccggtgtgttaccagtgtttagaggaa
ggcaagcatggaacacatgaagtcaaggctctgggagctatgtggaaactgcacaagggc
cagctgtcccaggccctcaacatcctgtctgacagagctaccgaggccaaggagttcctg
gttcagctgaggaacatggtgcagcatatccagcccgctgatggtccagggagaccctta
ctagtgacatcagggtggggaacactgaaggagaacggcgtggagttcgaagcctgcctg
gtggcgcagtgtgacgccctcatcgacgccctgaaccgacgcaaggcccagctgctgacc
cgcgtcaacaaggagcatgagcacaagctgaaggtggtgagggatcagatatctcattgt
acagtgaagctgcgtcagacaacaggcctgatggaatactgtgtggaggtcatcaaggag
aacgaccccagcggattcctacagatctcagacgccctgatcaggagggtgcacatgacg
gaggaccagtgggggaagggaaccctgacccccaggatgaccagtgactttgacctgacc
ctggacagcggacccctgttacagaccatccaccaactggacttcatacagatgaaagtt
ccttctgcccccatgctccagctggaggaatgctgcaccatcaacaacagcgccacgttg
tcatggaaacagccacctctctccaccatcgccgtggatggatacatcctggagctggac
gacggcaacgggggacagtacagggaagtgtatgtggggacggagacgatctgcacggtg
gatggactccactacaacagcacctacatgtccagggtcaaagccttcaacgccagtgga
gtaggacagtacagcaagatactggccatgcagacctccgagattgcctggttcaccttt
gaccctgcgtcagcccaccctgacatcatcctctccaatgacaacctgacagtgacgtgc
aacagctacgatgacagggtggtcatgggtaattccggcttctcccgcggtgtgcactac
tgggagatcacggtggatcgctatgacaaccacccggaccctgcgtttggggttgcccgc
ggcgacgtgctgaaggacgtgatgctggggaaagacgatagggcctgggccatgtatgtg
gacaacaaccgctcctggttcatgcacaacaactcacacaccaacaggacggacgggggc
gtcagtgaagagg

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (22)   
   KEGG ORTHOLOGY (1)   
   RefGene (18)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (10)   
   Pfam (10)   
All databases (37)   

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