KEGG   Salmo salar (Atlantic salmon): 106613748
Entry
106613748         CDS       T04363                                 
Name
(RefSeq) E3 ubiquitin-protein ligase RNF126-like
  KO
K11982  E3 ubiquitin-protein ligase RNF115/126 [EC:2.3.2.27]
Organism
sasa  Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:sasa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:sasa04131]
    106613748
   04121 Ubiquitin system [BR:sasa04121]
    106613748
Enzymes [BR:sasa01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     106613748
Membrane trafficking [BR:sasa04131]
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
   Rab associated proteins
    106613748
Ubiquitin system [BR:sasa04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    106613748
SSDB
Motif
Pfam: zf-RING_2 zf-C3HC4_2 zf-RING_11 zinc_ribbon_9 zf-rbx1 zf-C3HC4 zf-C3HC4_3 zf-RING_UBOX zf-RING_5 zf-ANAPC11 zf-RING_16 zf-Nse HypA C1_2 DZR Rad50_zn_hook zinc-ribbons_6 DZR_2 DUF4776
Other DBs
NCBI-GeneID: 106613748
NCBI-ProteinID: XP_014071797
UniProt: A0A1S3T5D3
Position
ssa10:19096735..19101618
AA seq 312 aa
MAEAPPWPRQFFCHRCSEEISPRLPDYTCPRCESGFIEELPEERSSENGSTSTISSGDQN
QQSFENVDSSQMATFPSGYGQFALGVFDDSFDFGAGQGTEDNRDTENRREQELASRQRYG
TRQPRGRHDIRGQAGRHEGVPTLEGIIQQLVNGIIAPTAMPNIGVGPWGVLHSNPMDYAW
GANGLDAIITQLLNQFENTGPPPADRDKIKSLPTIPITQEHVVSGLECPVCKEDYSAGEN
VRQLPCNHLFHNDCIIPWLEQHDTCPVCRKSLSGQNTAMNPPGLSGMNFAAASSPTPPSS
TSTNNENSANNC
NT seq 939 nt   +upstreamnt  +downstreamnt
atggcggaagcacctccatggcccagacagtttttctgtcacagatgttcggaagagatc
agccctcgcctcccggattacacatgtccacggtgtgaatctggcttcatcgaggaactg
ccggaggaaagaagcagtgaaaatgggtccacatccaccatctccagcggtgatcagaac
caacagtcgtttgagaatgtggactcttcacagatggctacattcccatcgggttatgga
cagtttgctctgggtgtctttgacgactcctttgattttggagcggggcagggaacagag
gacaaccgcgacacagagaaccggcgggaacaggaattggcatcacggcaacgttacggc
accaggcaacctcgcggccgccatgacatccggggacaggcagggagacatgagggagtg
cccactctagagggaatcattcagcagctagtgaatggaataatcgcccctacggcaatg
ccaaatattggtgtgggaccctggggcgtgctccactcaaaccccatggattatgcctgg
ggtgccaacggactagatgcaatcattacacagttattaaatcaatttgagaacactggc
cctccgccagctgacagggacaaaatcaagagccttcccacaatcccaatcacacaggag
catgttgtctcaggtctagaatgtccagtgtgtaaagaagactacagtgctggagaaaat
gttaggcaacttccatgtaatcatttgtttcacaatgattgcataataccatggcttgaa
cagcacgacacatgtccagtgtgcaggaaaagcttgagtggacagaacaccgctatgaat
cctccaggtctatcagggatgaactttgccgctgcctcatcccctacacccccgtcctcc
acttcaaccaacaacgagaactcagccaacaactgctaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (20)   
   KEGG ORTHOLOGY (1)   
   RefGene (16)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (19)   
   Pfam (19)   
All databases (50)   

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