KEGG   Streptomyces calvus: CD934_24360
Entry
CD934_24360       CDS       T06819                                 
Name
(GenBank) pectate lyase
  KO
K01728  pectate lyase [EC:4.2.2.2]
Organism
sast  Streptomyces calvus
Pathway
sast00040  Pentose and glucuronate interconversions
sast01100  Metabolic pathways
sast02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:sast00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    CD934_24360
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    CD934_24360
Enzymes [BR:sast01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.2  Acting on polysaccharides
    4.2.2.2  pectate lyase
     CD934_24360
SSDB
Motif
Pfam: Pectate_lyase_4 Beta_helix F5_F8_type_C
Other DBs
NCBI-ProteinID: QDI71458
UniProt: A0A514JY24
Position
5677592..5679154
AA seq 520 aa
MRRSVAVRLSALLATGALAAATGAALSTASTAEAAVAASGATGFATQNGGTTGGAGGQTV
RATTGTAIHQALCSRASSSTPIVIQVEGTINHGNTSKVSGDSCSTADGVIELKQISNVTI
VGVGNGAVFDQLGIHIRQSSNIIIQNVTIRNVKKSGSPTSNGGDAIGMESDVRNVWVDHT
TLEASGGESEGFDGLFDMKDNTQYVTLSYSTLRNSGRGGLIGSSESDTSNGYVTFHHNLY
ENIDSRTPLLRGGIAHIYNNHYKSLNESGINSRAGARAKVDNNYFEDSKDVLGTFYTDAA
GYWQVSGNIFDNVTWSERSGDHNPAGPNPTSNTSVSIPYAFTPDAASCVPSVVSQTAGAN
KGLKVSDGSCTPQTPDPTEPGPTDPDPDPTDPDPTDPPTGTNLSLTAGADGTSKASGTSY
GNVRDGNMSTYWSPAGSTGSVSVKWGSATTVSKVNIREAAGAEGNIGSWRVVNHDTGAVL
ASGSGAGVIGFAPTSLQKITFQITGSSGTPRIAEFETYAS
NT seq 1563 nt   +upstreamnt  +downstreamnt
atgagacgatccgtcgcagtgcgactttccgcgttactggccacgggtgccctcgcggca
gcgaccggcgcggccctgtccacggcgtccacggccgaggcggccgtcgccgcgtccggc
gccaccggcttcgcgacccagaacggcggcacgaccggcggtgcgggcggacagacggtc
cgtgccaccacgggcaccgcgatccaccaggccctgtgcagccgggccagcagctccacc
ccgatcgtcatccaggtcgagggcaccatcaaccacggcaacaccagcaaggtgtcgggt
gacagttgcagcaccgccgacggcgtgatcgagctgaagcagatcagcaacgtcaccatc
gtcggtgtcggcaacggtgccgtcttcgaccagctgggcatccacatccggcagtccagc
aacatcatcatccagaacgtgacgatccggaacgtcaagaagtcgggctcgcccacctcc
aacggcggcgacgccatcggcatggagagcgacgtccgcaacgtgtgggtcgaccacacc
acgctggaggcgtcgggcggcgagtcggagggcttcgacggcctcttcgacatgaaggac
aacacgcagtacgtcacgctgtcctacagcaccctgcgcaactccggccgtggcgggctg
atcggctccagcgagagcgacacgtcgaacggctacgtgacgttccaccacaacctgtac
gagaacatcgactcgcgcacaccgctgctgcgcggcggcatcgcgcacatctacaacaac
cactacaagagcctgaacgagtccggcatcaactcccgtgccggcgcccgcgcgaaggtg
gacaacaactacttcgaggactccaaggacgtcctcggcacgttctacaccgacgcggcc
ggctactggcaggtcagcggcaacatcttcgacaacgtgacgtggtccgagcgcagcggc
gaccacaacccggccggtccgaacccgacgtcgaacacctcggtcagcattccgtacgcg
ttcaccccggacgcggccagttgcgtgccgagcgtcgtgagccagacggcgggcgccaac
aagggcctgaaggtgtcggacggcagttgcaccccgcagaccccggacccgaccgagccg
ggcccgacggaccccgacccggacccgacggacccggacccgaccgacccgccgaccggc
accaacctcagcctcacggccggcgccgacggcaccagcaaggcaagcggcaccagctac
ggcaacgtccgtgacggcaacatgagcacctactggtcgccggccggatcgaccggctcg
gtctcggtcaagtggggttccgccaccaccgtctccaaggtcaacatccgtgaggcggcg
ggcgccgagggcaacatcggctcctggcgggtcgtcaaccacgacaccggcgccgtcctg
gcctccggcagcggagcgggcgtcatcggcttcgccccgacgtccctccagaagatcacc
ttccagatcaccggctcgtccgggacaccgcgcatcgcggagttcgaaacgtacgcgagc
tag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (2)   
   KEGG COMPOUND (2)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (17)   

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