KEGG   Sinomonas atrocyanea: SA2016_2988
Entry
SA2016_2988       CDS       T04286                                 
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
  KO
K03040  DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
Organism
satk  Sinomonas atrocyanea
Pathway
satk03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:satk00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    SA2016_2988
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:satk03021]
    SA2016_2988
   03400 DNA repair and recombination proteins [BR:satk03400]
    SA2016_2988
Enzymes [BR:satk01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     SA2016_2988
Transcription machinery [BR:satk03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     SA2016_2988
DNA repair and recombination proteins [BR:satk03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      SA2016_2988
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_A_CTD RNA_pol_L HHH_5
Other DBs
NCBI-ProteinID: AMM33653
UniProt: A0A127A2X5
Position
complement(3219598..3220608)
AA seq 336 aa
MLIAQRPTLSEEVVSENRSRFVIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSIRIDGVL
HEFTTVEGVKEDVTEIILNLKSLSISSDQDEPVVAYLRKQGPGVVTAADIAPPAGVEIHN
PDLHIATLNSKGKFELELTIERGRGYVSAAQNKSADAEIGRIPVDSIYSPVLKVTFRVEA
TRVEQRTDFDKLIVDVETKPAIKPRDAVASAGTTLVELFGLARELNTAAEGIEIGPSPTD
AALAADMALPIEDLDLTVRSYNCLKREGIHTVGELVARSEADLMDIRNFGAKSIDEVKAK
LLELGLSLKDSPVGFDPLAARAAADEDEAAYSDDEL
NT seq 1011 nt   +upstreamnt  +downstreamnt
gtgctcattgcacagcgccccaccctgtctgaagaagtagtatccgagaaccgctcccgc
ttcgtcatcgagccgctggagccgggcttcggctacaccctcggcaactcgctgcgccgc
accctgctgtcctcgatccccggggctgccgtcaccagcatccggattgacggcgtgctg
cacgaattcaccacggttgagggggtcaaggaggatgtcaccgagatcatcctcaacctg
aagagcctctcgatctcctccgaccaggacgagcccgtcgtcgcgtacctgcgcaagcag
ggccccggcgtcgtgacggccgcggacatcgccccgccggccggcgtggagatccacaac
ccggatctgcacatcgccaccctgaactccaagggcaagttcgagctcgagctgaccatc
gagcgcggccgcgggtacgtctccgcggcgcagaacaagtccgcggacgcggagatcggc
cgcatcccggtcgactcgatctactccccggtgctgaaggtgaccttccgcgtcgaggcg
acccgtgtcgagcagcgcaccgacttcgacaagctcatcgtcgatgtggagacgaagccg
gccatcaagccgcgcgacgccgtcgcgtcggccggcaccacgctcgtggagctgttcggc
ctcgcccgcgagctgaacaccgccgccgagggcatcgagatcggcccgtccccgacggac
gccgcgctcgctgcggacatggccctgccgatcgaggacctggacctcaccgtccgttcg
tacaactgcctcaagcgcgagggcatccacacggtgggcgagctcgtggcccgttccgag
gcggacctgatggacatccgcaacttcggtgccaagtcgatcgacgaggtcaaggccaag
ctcctcgagctgggcctctcgctcaaggactcgccggtcgggttcgatcccctcgctgcg
cgcgctgccgccgacgaggacgaagccgcttacagcgacgacgagctctaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   RefGene (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (16)   

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