KEGG   Sulfobacillus acidophilus TPY: TPY_0903
Entry
TPY_0903          CDS       T01576                                 
Symbol
alkA
Name
(GenBank) putative DNA-3-methyladenine glycosylase II
  KO
K01247  DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
Organism
say  Sulfobacillus acidophilus TPY
Pathway
say03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:say00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    TPY_0903 (alkA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:say03400]
    TPY_0903 (alkA)
Enzymes [BR:say01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.21  DNA-3-methyladenine glycosylase II
     TPY_0903 (alkA)
DNA repair and recombination proteins [BR:say03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     TPY_0903 (alkA)
SSDB
Motif
Pfam: HhH-GPD
Other DBs
NCBI-ProteinID: AEJ39093
Position
851877..852779
AA seq 300 aa
MEDFMREAIEVRAPYDFRRMLTRIQSRPTSLTWVDMTAGQWARVLYVEGEPVPVRVSFSG
TVEKPRLLVESPIVGNRQALILAEVRRLLSVEVPLEPFLAQAALRPEWITVLSRWAGYRV
ILDGDPFESLVRTVIGQQIHVAVAAKLVDRLVVRAGRRITFEDISLGVFPRADTLRHWSS
EEWTALGFSAPKARYLTTLAAVAADEGWNGKTFQEMSDDAVMKRLLPLPGIGRWTAECFL
IFGLGRLDVVPAGDLGLQRALQRLYGWSQKPSESEVREVLAPFQPWRSLATLYLWQSLLP
NT seq 903 nt   +upstreamnt  +downstreamnt
gtggaggatttcatgcgggaagctatcgaggtgcgcgccccttacgactttcgccggatg
ctgacgcgcatccaatcccggccgacttccctcacttgggtcgatatgacggcgggacag
tgggcccgggtgctttatgttgaaggcgaaccggttccggtgcgcgtcagcttttccggt
accgtggaaaagccgcgactcttggtcgagtctccgattgtcggcaatcggcaggcgctc
atattggccgaggtccgtcggcttttgtcggtcgaggtcccgttagagccttttctggcc
caagcggctttaaggccggagtggattaccgtgttgagtcggtgggccggataccgcgtg
attcttgacggggatcccttcgaatccctcgtgcggaccgtcatcggtcagcagattcac
gtggcggtcgccgccaaactggtcgatcggttggtcgtccgggccggtcgacgtatcacg
tttgaggacatttctttgggggtgtttccgcgggcggacaccctccggcactggtcttcc
gaggaatggacggctctcgggtttagtgccccaaaagcccgctatctcacgacattggcc
gcggtagcggcggacgaagggtggaacgggaagacgtttcaggagatgtcggatgacgcg
gtgatgaaacggctattgccgttgccggggattggacgttggaccgcggaatgctttttg
atttttggtttaggacgcttggatgtggtgcccgccggagatttaggactccagcgggcc
cttcagcgtctttacgggtggtcacagaagccgtcggagtcggaggtgcgggaggttttg
gctccgtttcaaccgtggcgtagtttggccacgctctatttatggcaaagtcttttgccg
tga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (8)   
   KEGG ORTHOLOGY (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (15)   

Download RDF
DBGET integrated database retrieval system