KEGG   Shewanella amazonensis: Sama_1973
Entry
Sama_1973         CDS       T00445                                 
Name
(GenBank) Exodeoxyribonuclease I subunit C
  KO
K01141  exodeoxyribonuclease I [EC:3.1.11.1]
Organism
saz  Shewanella amazonensis
Pathway
saz03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:saz00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    Sama_1973
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:saz03400]
    Sama_1973
Enzymes [BR:saz01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.1  exodeoxyribonuclease I
     Sama_1973
DNA repair and recombination proteins [BR:saz03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA exonucleases
     Sama_1973
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     Sama_1973
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      Sama_1973
SSDB
Motif
Pfam: Exonuc_X-T_C RNase_T
Other DBs
NCBI-ProteinID: ABM00179
UniProt: A1S722
Position
2401157..2402569
AA seq 470 aa
MENYIQPTIFWHDYETFGASPAKDRPAQFAGVRTDLDLNIIDEPVTFYCRLSPDYLPAPE
AILITGITPQLANRQGLPETEFMGRIQAIFSRPNTCVAGYNSLRFDDEVSRYGFYRNFID
PYAREWQQGNSRWDIIDLVRACYALRPEGINWPEKEDGSPSFKLEHLTAANGLGHDKAHD
AMSDVYATIALARLIKEKQPKLFDYYFRLRRKQAVAEQIDVLAMQPLVHISSKIPATQGC
ATLIAPVAHHMRNKNAVICVNLAMDIQPLIDLDVDALRTRLYTKREDLANDELPVPVKQI
HLNKCPFVANAKTLDDANAERLGIDKAFAREQYRLLKQHPEIREKLTALFEEEPQGMSND
PDYSLYSGGFFSPADRAKMDIIRNTSPEHLAALELQFDDTRLPEMLFRYRARNYPLTLSY
DESLRWREFCQARLNDPDYVIRLENLLEETTKDEKKQKLLGALCQYLQSL
NT seq 1413 nt   +upstreamnt  +downstreamnt
atggaaaactatattcagcccactattttttggcacgactatgaaacgttcggggccagt
cctgcgaaggacaggcctgcacaatttgccggtgtcagaaccgatctggacctgaatatc
atcgacgagcctgtcacattttactgccgtttaagccccgattatttacccgcaccggag
gcgattctcatcacaggtattacgccgcaactggcgaatcgtcagggcttgcctgaaacc
gaattcatgggccgtatccaggccattttcagcagacccaatacctgtgttgcgggctac
aactcgctgcgctttgatgatgaagtaagtcgctacggtttttaccgcaactttattgac
ccttatgcccgtgagtggcaacagggcaattcccgctgggatattatcgatcttgtgcgt
gcctgctatgccctacgcccggaaggcattaactggccagaaaaagaggacggcagtccc
agctttaaacttgagcatctgacagcagccaatggccttggacacgacaaggcccacgat
gccatgtcagatgtgtatgccacaatcgcactggcccggctaatcaaggaaaagcagccc
aagctgttcgactattacttccgcttaaggcgtaaacaagccgtggccgaacaaatcgat
gtactggcgatgcagccgctggtgcacatcagctccaaaataccggcaacccagggctgt
gcaaccttgatagctccggtagcgcaccatatgcgcaataaaaatgccgtcatttgcgtc
aatctggccatggacattcagccactgattgacctcgatgtggatgcactgagaacccgg
ctttataccaagcgtgaagacctcgccaatgatgagctgcccgtgcctgtgaagcaaatt
catctgaataaatgcccctttgtcgccaacgccaaaactctggatgacgccaatgctgag
cgattgggcatagataaagcctttgcccgtgaacaatatcgcttactcaaacagcatcct
gagatccgcgaaaaacttacggcactgtttgaggaagaaccccagggtatgtccaacgat
cccgactactccctctacagtggtggttttttctctcctgccgatcgtgcaaaaatggac
atcatacggaatacgtcgccggagcacttagccgcgctggaactgcagtttgatgatacc
cgtctgccagagatgctctttcgctaccgggctcgcaactacccgctcaccttgtcctat
gatgaaagcctgcgctggcgagagttttgtcaggcccgcttgaacgaccctgactatgtc
atccgccttgaaaacttgctggaagaaaccaccaaggatgaaaaaaagcaaaagctcctc
ggcgctttatgtcagtacctgcagtcgctttag

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