KEGG   Sulfurospirillum barnesii: Sulba_1947
Entry
Sulba_1947        CDS       T02139                                 
Name
(GenBank) DNA/RNA helicase, superfamily II
  KO
K11927  ATP-dependent RNA helicase RhlE [EC:3.6.4.13]
Organism
sba  Sulfurospirillum barnesii
Pathway
sba03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:sba00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Sulba_1947
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sba03019]
    Sulba_1947
Messenger RNA biogenesis [BR:sba03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     Sulba_1947
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_19 P-loop_SecA UvrD-helicase CMS1 ssDNA-exonuc_C
Other DBs
NCBI-ProteinID: AFL69226
UniProt: I3XZ52
Position
1926596..1927849
AA seq 417 aa
MLFSDLNLNASLLKAVQEEGYTTPTPVQEKAIPFILQGRDMLAGAQTGTGKTAGFTLPIL
ELLSAKPRNKAKPALRVLILTPTRELAAQVGESVQTYGKYLPFKSAVIFGGVGIHPQIQT
LKNGVDILVATPGRLLDHVSQGTINLKEIDTFVLDEADRMLDMGFIKDIRKVIALLPSKR
QNLLFSATYSDEIKKLCESILKNPAVVEVARRNTSSELVNQRVIIVDCKRKTALLGKLIQ
EQKWEQVLVFTRTKHHANKVSEYLNKIGISSSAIHGNKSQGARTKALADFKGGSIKVLVA
TDIAARGLDIDQLPHVVNLELPNIAEDYVHRIGRTGRAGNNGEAISLVCVDEFEYLKGIE
KLIKRSFEHEIIEGFEPDPSIKAVPIQQGRGAKPQGQPKRRDNAPREYVEKRREKKR
NT seq 1254 nt   +upstreamnt  +downstreamnt
atgttattttcagatttaaaccttaacgcctctttgttaaaagccgtgcaagaagaaggc
tacacgaccccaacacctgtgcaagaaaaagccattcccttcattttacaggggcgtgat
atgctagcaggtgcccaaacaggtacaggaaaaactgctggttttaccttgccaatttta
gaacttctatcggctaaaccacgtaataaagccaaacctgctcttcgggtgctcatctta
acccctacacgagaactggccgcacaagtgggcgagagtgtgcaaacgtacgggaagtat
ttaccgtttaaaagtgcggttatttttggaggcgtgggcattcatccgcaaattcaaacg
ctaaaaaatggtgtggatattttggtggcaacccctggtcgtttacttgaccacgtctca
caaggaaccattaacctcaaagagattgatacctttgtactggatgaagcagatagaatg
cttgatatgggctttatcaaagacattcgcaaagtcattgccctgcttccctctaaacgt
caaaaccttcttttttcggctacctattcggatgagataaaaaagctctgtgagtccatt
ttaaaaaatccagccgtggtggaagtagcacgccgtaacacctcaagtgaactggtcaat
cagcgtgtcatcattgtggattgtaagcgaaaaacagctcttttaggcaaactgattcaa
gaacaaaaatgggaacaagtactggtgtttactcgcaccaaacaccatgccaataaagtc
tctgaatacctcaacaaaataggcattagctcatcggcaattcatggcaataaaagtcaa
ggtgctcgtaccaaagccttggctgattttaaaggtggcagcattaaagtgctggtcgca
accgatattgccgcacgaggactggacattgaccaattgcctcatgttgtgaatttagaa
ctgcccaacattgctgaagattacgtgcaccgcattggacgaacaggacgggctggtaac
aatggtgaagccatttccctcgtgtgtgtcgatgaatttgagtatttaaaagggattgaa
aagctcattaaacgctcgtttgagcatgaaattattgaaggctttgagccagaccctagc
attaaagccgtgcccattcagcaaggaagaggcgctaaacctcagggacaacccaaacgc
cgtgataatgcacctcgtgaatacgttgaaaaaagaagagaaaaaaagcgatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (17)   

Download RDF
DBGET integrated database retrieval system