KEGG   Shewanella baltica BA175: Sbal175_0873
Entry
Sbal175_0873      CDS       T02014                                 
Name
(GenBank) poly(A) polymerase
  KO
K00970  poly(A) polymerase [EC:2.7.7.19]
Organism
sbb  Shewanella baltica BA175
Pathway
sbb03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:sbb00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Sbal175_0873
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sbb03019]
    Sbal175_0873
Enzymes [BR:sbb01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.19  polynucleotide adenylyltransferase
     Sbal175_0873
Messenger RNA biogenesis [BR:sbb03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Others
     Sbal175_0873
SSDB
Motif
Pfam: PolyA_pol_arg_C PolyA_pol PolyA_pol_RNAbd
Other DBs
NCBI-ProteinID: AEG10153
UniProt: G0AYJ6
Position
complement(1049457..1050998)
AA seq 513 aa
MVYDSRQIFNQITDHISRCPIFRRISQFCKQLFEDAPKTTAPTQAQIEPTTPEQSSGALS
LELVPRDAHTISRKQISENALKVLYRLNKSGFKAYLVGGGVRDLLLGIEPKDFDVVTNAT
PEEIKKLFRNCRVVGRRFRLAHIVFGRDVIEVATFRGHHGESNEKVSKANAEGRLLRDNV
YGEIDEDAERRDFTVNALYYDISDYSIRSYGGGMTDLKAGTLRLIGDPETRYREDPVRML
RAVRFATKLNMGIETVTAAPIKQLAPLLKDIPAARMYEEVLKLFFAGKALANFELMQEYK
LFAPLFPQVAALLKDDPKGTTMKMVQAIMKSTDQRVNEDKPVTPSFFYAALLWYPLRQRA
EDIAVESGLTLYDAFFAAMGDVMEQQCQTISIPRRFSTPAKDIWQLQLRFDRSQGTRAFK
LMEHPKFRAAYDLLLLRGEVEAGNVAKSAAWWQQFVEADETERLAIARSGSKSPNRNRNA
TQRRRRPRAPNADGSAATSAPKTSGTPKAKAAE
NT seq 1542 nt   +upstreamnt  +downstreamnt
ttggtatatgatagccgccagatttttaatcaaataacagatcatatttcgaggtgtccc
atttttcgccgtatcagccaattctgcaaacagctatttgaagacgcgcctaaaacgacc
gctccgactcaagctcagattgaaccaacaacacctgaacaaagttccggtgcgttaagc
ttagagttagtgccgagagatgcccataccatctcgcgcaaacaaatcagcgaaaatgcc
cttaaggtattatacagactgaataaatcaggttttaaagcctatttagtcggcggcggt
gtacgcgatttactcttagggattgaaccgaaagatttcgacgtcgtgaccaatgcgaca
ccggaagaaatcaaaaaactattccgcaactgccgagtcgtcggtcgtcgtttccgtctg
gcccatatcgttttcggccgcgatgttatcgaagtggcgacctttcgtggtcaccatggc
gaaagcaatgagaaagtctctaaagctaatgccgaagggcgtttgctgcgcgataacgtt
tatggcgaaatcgacgaagatgccgagcgccgcgactttaccgtcaatgccctctattac
gatatcagcgattactcgatccgcagctacggcggcggtatgacagatctcaaagcgggc
acactaagattaattggcgatccagaaacccgttaccgtgaagatcccgtgcgtatgtta
agggcggtgcgtttcgccactaaactcaacatgggtatcgaaaccgtcactgcggcgccg
attaaacaattagcgccactgctaaaagatattcctgctgcgcgtatgtacgaagaagtg
ctgaaactcttctttgcaggcaaagccttagccaacttcgaactgatgcaagagtacaag
ctattcgcgccgctgtttccgcaagtggccgctctgctaaaagatgatcctaaaggcacg
accatgaaaatggtgcaagccatcatgaagagcacagatcaaagagttaacgaagataag
ccggtgacgccttcattcttctatgctgcgcttctctggtatccactgcgtcaacgcgcc
gaagatattgccgttgaaagtggcctgacgttatacgatgccttctttgccgctatgggc
gatgtgatggagcagcaatgccaaaccattagcattccacgccgttttagtactccagca
aaagacatttggcagttgcagttacgctttgaccgtagccaaggtactcgcgcctttaaa
ctgatggaacaccctaagtttagagccgcatacgatttgctattgctcaggggcgaagtc
gaggcgggtaatgtcgctaagagtgccgcttggtggcaacagtttgttgaagccgatgaa
actgaacgcttagccattgcgcgtagtggcagtaaatcgccgaatcgtaaccgtaatgcc
actcaacgtcgtcgccgtcctcgcgcgccgaatgccgatggttcagccgcgacgagcgca
cctaaaacaagtggcacgccaaaagcgaaagcggctgaataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (13)   

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