KEGG   Shigella boydii CDC 3083-94 (serotype 18): SbBS512_E4572
Entry
SbBS512_E4572     CDS       T00700                                 
Symbol
uvrA
Name
(GenBank) excinuclease ABC, A subunit
  KO
K03701  excinuclease ABC subunit A
Organism
sbc  Shigella boydii CDC 3083-94 (serotype 18)
Pathway
sbc03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:sbc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    SbBS512_E4572 (uvrA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sbc03400]
    SbBS512_E4572 (uvrA)
DNA repair and recombination proteins [BR:sbc03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     SbBS512_E4572 (uvrA)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      SbBS512_E4572 (uvrA)
SSDB
Motif
Pfam: UvrA_DNA-bind UvrA_inter ABC_tran SMC_N AAA_16 AAA_29 nSTAND1 RsgA_GTPase DnaJ_CXXCXGXG AAA_23 AAA_25 AAA_21 NACHT Viral_helicase1 cobW ExoX-like_C ScfRs
Other DBs
NCBI-ProteinID: ACD07004
UniProt: B2TX89
Position
complement(4269421..4272243)
AA seq 940 aa
MDKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAY
ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRC
PDHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARID
GEVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDP
KAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPEL
SLAGGAIRGWDRRNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKY
MNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRREARH
VYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTL
SRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNT
VIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEV
PKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQR
QLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPE
SRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKY
KGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKL
ARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADW
IVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML
NT seq 2823 nt   +upstreamnt  +downstreamnt
atggataagatcgaagttcggggcgcccgcacccataatctcaaaaacatcaacctcgtt
atcccccgcgacaagctcattgtcgtgaccgggctttcgggttctggcaaatcctcgctc
gctttcgacaccttatatgccgaagggcagcgccgttacgttgaatccctttccgcctat
gcgcggcagtttctgtcactgatggaaaagccggacgtcgatcatattgaggggctttct
cctgccatctcaattgagcagaaatcgacgtctcataacccgcgttctacggtggggaca
atcaccgaaatccacgactatttgcgtttgttgttcgcccgcgtcggcgaaccgcgctgt
ccggaccacgacgtcccgctggcggcgcaaaccgtcagccagatggtggataacgtgctg
tcgcagccggaaggcaagcgtctgatgctactcgcgccaatcattaaagagcgcaaaggc
gaacacaccaaaacgctggagaacctagcaagccagggttacatccgtgctcgtattgat
ggcgaagtctgcgatctttccgatccgccgaaactggaactgcaaaagaaacacactatt
gaagtggtggttgatcgcttcaaggtgcgtgacgatcttacccaacgtcttgcggagtcg
tttgaaaccgcgctggagctttccggtggtacagcggtagtggcggatatggacgacccg
aaagcggaagagctgctgttctccgccaacttcgcctgcccaatttgcggctacagtatg
cgtgaactggagccacgactgttttcgtttaacaacccggcaggtgcctgcccaacctgt
gacggccttggcgtacagcaatatttcgatcctgaccgcgtgatccaaaaccccgagctg
tcactggctggcggtgcgatccgtggctgggatcgccgcaacttctattacttccagatg
ctgaaatcgctggcagatcactataagttcgacgtcgaagcgccgtggggcagcctgagc
gcgaacgtgcataaagtggtgttgtacggttctggcaaagaaaacattgaattcaaatac
atgaacgatcgtggcgatacctccatccgtcgtcatccgttcgaaggcgtgctgcacaat
atggagcgccgttataaagagacagaatccagtgcggtacgtgaagaattagccaagttt
atcagcaatcgcccatgcgccagctgcgaagggacgcgtctgcgtcgggaagcgcgccac
gtttatgtcgagaatacgccgctgcctgctatctccgacatgagcatcggtcatgcgatg
gaattcttcaacaatctcaaactagctggtcagcgggcgaagattgcagaaaaaatcctt
aaagagatcggcgatcgtctgaaattcctcgttaacgtcggcctgaattacctgacactt
tcccgctcggcagaaacactttccggcggtgaagcccagcgtatccgtctggcgagccag
attggtgcgggcctggttggcgttatgtatgtactggacgagccgtctatcggcctgcac
cagcgcgataacgagcgcctgttgggtacgcttatccatctgcgcgatctcggtaatacc
gtgattgtggtggagcatgacgaagacgcaattcgcgccgctgaccatgtgatcgatatc
ggtcctggtgcgggtgttcacggcggtgaagtggtcgcagaaggtccgctggaagcgatc
atggcggtgcctgaatcgttgaccgggcagtacatgagcggtaaacgcaagattgaagtg
ccgaagaaacgcgttccggcgaatccagaaaaagtgctgaagctgacaggtgcacgcggc
aacaacctgaaggacgtgacgctcacgctgccagtcggtctgtttacctgcatcacaggg
gtttcaggttccggtaaatcgacgctgattaacgacacactgttcccgattgcccaacgc
cagttgaatggtgcgaccatcgccgaaccggcaccgtatcgcgatattcaggggctggag
catttcgataaagtgatcgatatcgaccaaagcccaattggtcgtactccacgttctaac
ccggcgacctataccggcgtgtttacacctgtgcgcgaactgtttgcgggcgtaccggaa
tcccgtgcgcgtggttatacgccaggacgtttcagctttaacgtccgtggcgggcgctgc
gaagcctgtcagggcgacggtgtgatcaaagtggagatgcacttcctgccggatatctac
gtgccgtgcgatcagtgcaaaggtaaacgctataaccgtgaaacactggaaattaagtac
aaaggcaaaaccatccacgaagtgctggatatgaccatcgaagaggcgcgtgagttcttt
gatgcggtgccagctctggcgcgtaagctgcaaacgttgatggacgttggtctgacgtac
attcgcctggggcagtccgcaaccacactttctggtggtgaagcccagcgcgtgaagctg
gcgcgtgagctgtcaaaacgtggcaccgggcagacgctgtatattctcgacgagccgacc
accggtctgcacttcgccgatattcagcaactcctcgacgtgctgcataaactgcgcgat
cagggcaataccattgtggtgattgagcacaatctcgacgtgatcaaaaccgctgactgg
attgtcgacctggggccagaaggcggcagtggcggcggcgaaatcctcgtctccggtacg
ccagaaaccgtcgcggagtgcgaagcttcgcatacggcacgcttcctcaagccgatgctg
taa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (17)   
   Pfam (17)   
All databases (25)   

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