KEGG   Sphingobium baderi: ATN00_00350
Entry
ATN00_00350       CDS       T04194                                 
Name
(GenBank) DNA topoisomerase
  KO
K03168  DNA topoisomerase I [EC:5.6.2.1]
Organism
sbd  Sphingobium baderi
Brite
KEGG Orthology (KO) [BR:sbd00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sbd03032]
    ATN00_00350
   03400 DNA repair and recombination proteins [BR:sbd03400]
    ATN00_00350
Enzymes [BR:sbd01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     ATN00_00350
DNA replication proteins [BR:sbd03032]
 Prokaryotic type
  DNA Topoisomerases
   ATN00_00350
DNA repair and recombination proteins [BR:sbd03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      ATN00_00350
SSDB
Motif
Pfam: Topoisom_I Top1B_N_bact
Other DBs
NCBI-ProteinID: ALR18994
UniProt: A0A0S3EUF8
Position
66607..67614
AA seq 335 aa
MPAHAIIHSDDSQPGITRRALKRGWAYFGVDGTRITDREEIDRLNAIAMPPAYTNCWFCL
SPYGHIQATGQDARGRKQYRYHPDFRAEREAEKYAGCLAFGLALPRLRARLDTDLSCRGM
RKERTIAAVVRLLDLAKLRVGNEHYATTNKSFGATTLRRRHVDMAGHSLMLRYRAKSGLL
REMTVTDRRLSRFLRKLHDLPGQHLFQYLDEAGEARPITSGDVNAYIAETMGDAFTAKHF
RTWGASTIAFAALCEGPVSLKQMIAPVAEALGNTPAISRKSYIHPALIDLCRNGQDKWRE
GLRLPRRTRYLSRHERGLIALLEMLADKEPLPAAA
NT seq 1008 nt   +upstreamnt  +downstreamnt
atgcccgcacatgccattatccattccgacgatagccagccgggcatcacccgccgggca
ttgaagcgaggttgggcttatttcggcgttgacgggacgcgcatcaccgacagggaggag
atcgaccggctgaacgccatcgccatgccgcctgcctatacgaactgctggttctgcctc
tccccctatggccatatccaggcgacggggcaggatgcccggggccgcaagcaatatcgc
tatcaccccgatttccgggccgagcgggaagcggagaaatatgccggatgcctcgccttc
ggccttgctctgccgcgcctgcgcgcccggctggacaccgatttgtcctgccgcgggatg
cggaaggaaaggaccatcgccgccgtggtgcgcctgctcgaccttgccaagttgcgcgtg
gggaatgaacattacgccaccaccaacaagagcttcggggcgaccaccttgcgccgccgc
catgtggacatggcggggcattcgctgatgctgcgctatcgcgctaagtctgggctgcta
cgcgaaatgacggtgacagaccggcggctgtcgcgcttcttgcggaagctgcatgacctg
ccgggccaacatctgttccaatatctggacgaagcgggggaagcgcggccgatcacctcc
ggcgacgtcaacgcctatatcgccgaaacgatgggcgatgcgttcaccgccaagcatttc
cgcacttggggcgcttccaccatcgccttcgcagcgctgtgcgaagggccggtctcgctc
aagcagatgatcgcgccagtcgccgaagcgctgggcaatacccctgccatcagccggaaa
agctatatccatcccgcgcttatcgacttgtgcaggaacggccaggacaaatggcgtgaa
gggcttcgcttgccgcgccggacgcgctatctgtcgcgacatgagcgcgggttgatcgcg
ctgctggaaatgctggcggataaggagccgctgcctgcggcggcctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (12)   

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